EST details — SGN-E375441

Search information 
Request: 375441Match: SGN-E375441
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180376Clone name: TUS-34-D6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180376 is on microarray TOM1 spot ID 1-1-3.4.19.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C33111 [cLEG-25-G5] Trace: SGN-T67968 EST: SGN-E253045 Direction: 5' Facility: TIGR
Clone: SGN-C180376 [TUS-34-D6] Trace: SGN-T187208 EST: SGN-E375440 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E375441Length: 329 bp (940 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375441 [] (trimmed) GAAAAGATGAAAGAGGAGATGATTGGCAAGCTCAAAGAAATGGGAAATTCCATTTTGGGTCGATTTGGTATGAGCGTTGACAACTTCAAAACAGT
TAAAGACCCAAACACCGGTTCCTACTCTGTTCAATTTCAGAAGTGATGAGGGTTTCTCTCATGTTGGCGAAATTTGCATTTCTTGAATGAAAGAT
TTGATCAAACAGGACACATTTGGGTGTGCATGTTTTGAACTATGTATCACGTTATAGCTTTTGAAGTATATAAGTGTTGGCCAAAAACTTGATAT
TTTAGATTTCTATACTGTTATAGAAGCAGATGGCTTGTAGCCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375441] SGN-U585333 Tomato 200607 Build 2 27 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187209 [Download][View] Facility Assigned ID: FA0AAD22DB03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.921 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5