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EST details — SGN-E375443

Search information 
Request: 375443Match: SGN-E375443
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180380Clone name: TUS-34-D10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180380 is on microarray TOM1 spot ID 1-1-7.4.19.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C33211 [cLEG-25-N20] Trace: SGN-T68053 EST: SGN-E253130 Direction: 5' Facility: TIGR
Clone: SGN-C180380 [TUS-34-D10] Trace: SGN-T187210 EST: SGN-E375442 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375443Length: 537 bp (929 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375443 [] (trimmed) GGAGGATCCATAATCAATATCTCTTCTATCGCTGGTATTAATCGTGGACAACTACCAGGTAGTCTTGCTTATACGTCTTCAAAGGAAGCTCTCAA
CAGCATTACAAAGGTGTTGGCCCTCGAATTGGGACCATACAAGATCAGAGTGAACTCAATATCACCTGGACTTTTCAAATCTGAGATAACAGAGG
GTCTCATACAAAAAGACTGGATTAAAAACATTGAACTGAGAACTATTCCGTTGAGAACACATGGAACATCACATCCCGCTTTAACTTCAGTTGTA
CGTTACCTGATCCACGATTCCTCGGAATATGTTTCAGGTAACATGTTCATAGTAGATGCAGGAGCTACTTTACCCGGTGTCCCGATTTTCTCATC
CCTCTAGTTATAGAGGAAAACAAATTAGAAAAATAAGGATGGAAAATGGAAATGTTTGGGAAAGAACAGAGGCTTTACTTTGGTTGCCTAAAAGA
AAATTTTATGTTTTTGTTTTGCTCATGGAATTGTTTTTATATTTGTATCTGTTATACCATTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375443] SGN-U581798 Tomato 200607 Build 2 74 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187211 [Download][View] Facility Assigned ID: FA0AAD22DB05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5