EST details — SGN-E375446
Search information |
Request: 375446 | Match: SGN-E375446 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C180388 | Clone name: TUS-34-D18 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C180388 is on microarray TOM1 spot ID 1-1-7.4.19.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C33270 [cLEG-26-C1] | Trace: SGN-T68064 | EST: SGN-E253141 | Direction: 5' | Facility: TIGR |
Clone: SGN-C180388 [TUS-34-D18] | Trace: SGN-T187215 | EST: SGN-E375447 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E375446 | Length: 222 bp (1068 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E375446 [] (trimmed)
AAATCTGTTCCGGAATTGTAACTTTAAAAAACAGAGTGCATATAGAATGAATTTTCTGAGAATTCTCAGGTATAGATAAATTTTCTAAAGGCATG
TCTAAGAATTTTGCAGCGTAAAATTTCACAAAATTGCCTCAACTCTATGGTGCAACTGAAAAATCAACCAAGAAAAAAAAAGCTCAGCCCCAAAA
CCTACTAATAAAACCTTTCTTATCTTTCTTCA
TCTAAGAATTTTGCAGCGTAAAATTTCACAAAATTGCCTCAACTCTATGGTGCAACTGAAAAATCAACCAAGAAAAAAAAAGCTCAGCCCCAAAA
CCTACTAATAAAACCTTTCTTATCTTTCTTCA
Unigenes |
Current Unigene builds | |||||
[SGN-E375446] | SGN-U587187 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T187214 [Download][View] | Facility Assigned ID: FA0AAD22DB09FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.905 | Expected Error Rate: 0.0015 | Quality Trim Threshold: 14.5 |