EST details — SGN-E375456

Search information 
Request: 375456Match: SGN-E375456
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180430Clone name: TUS-34-F12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180430 is on microarray TOM1 spot ID 1-1-5.2.19.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C33500 [cLEG-27-C10] Trace: SGN-T68465 EST: SGN-E254389 Direction: 5' Facility: TIGR
Clone: SGN-C180430 [TUS-34-F12] Trace: SGN-T187225 EST: SGN-E375457 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E375456Length: 731 bp (910 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375456 [] (trimmed) AAAACCCAAATGAAATATATTATATATATATTGCACATGGGTCTTGTCTATAAACAACTACACAAACACAGAAGGAAAACATATACTAGTATCTA
CCACCACCACACAGTGCAAGGTTATTTTCTGGCCTTGGGAATCAGAAGCAGCGGTTCTTTCTTTTGTAGTGTTACTCCAAACTGTTCAGTCATGT
CTAGCTCAACAGGACATTTTCCATGAGGAAGTTCCCAATCAAAGAAACGAACAAGTAAAGCAAGGACTAACGGAATTTCTATTGCAGCCATTGGC
AGGGCTGGGCATATTCTTCGTCCTGCACCAAAGGGTAAGTACTCAAAGTCATTCCCTTTGAAATCCATATCAAAATTCAAAAACCTCTGTGGTCT
AAACATGTCTGGTTCTTCCCATATCAAAGGATCCCTTGTGATAGCCCAGACGTTAACAAAGATTTGCGCGTCTTTAGGAATTGTGTAACTCATCA
CTTGGCATGTTTTGATAGCACGATGTGGAAGCAACAATGGTCCTGGAGGATGCAACCTAAGTGTTTCCTTTACACAGGCTTGGATATAGGACATC
TGCAGCAATTGAGATTCTTTTAGGTAATCACTTTCACTGAGTTCTATCTCAAGCTCCTCTTGAACTTTCTTCATTGACTCTACGTTCTTTATCAG
TTCTGCCATCGCCCACTCAATTGTTGAGGTAGTGGTGTCTGAACCAGCTAAGAGTAACTCCTAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375456] SGN-U569640 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187224 [Download][View] Facility Assigned ID: FA0AAD22DC06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5