EST details — SGN-E375496

Search information 
Request: 375496Match: SGN-E375496
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180618Clone name: TUS-34-N8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180618 is on microarray TOM1 spot ID 1-1-1.2.19.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C33973 [cLEG-29-C8] Trace: SGN-T68779 EST: SGN-E254513 Direction: 5' Facility: TIGR
Clone: SGN-C180618 [TUS-34-N8] Trace: SGN-T187263 EST: SGN-E375495 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E375496Length: 679 bp (919 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375496 [] (trimmed) CCATTACTATATCACACTTCTCTCACATAATTATCCTCTTTTTCTTTTCCTTTTCCTTTTCCTTTTTTCTTCTTCTTTGATGAGCTCTACCATTT
TGACTTGCTTCATTCTTCACAGATCAGGATAGTCTGTCGTGCCGTGTTAGCTGTTGTGATCCTTTTGTAATTGTAGCTTTGAAGTCCACCATGTA
ATGAAGATTATACCCAGGGCTTTTTGATCTATCTACTTATTATAAACTTCACCAGAATCAGCTTTTTTTACGAAGAATGTCTGTGTTACCAAAAA
TTGATTCTATCAAAATTAGAGAGGTATGGAGCGATAATCTTGAGAAGGAATTTGCTTTGATCCGTCAAATTGTGGATGACTATCCTTACATTGCC
ATGGACACCGAGTTTCCAGGGGTGGTGCTTCGTCCTGTTGGCAATTTCAAGCATATTAATGAGTATAATTATCAGACCTTGAAGGACAATGTTGA
TATGTTGAACTTGATTCAGTTAGGTCTCACATTTTCCGATGAAAATGGCAATCTACCTACTTGTGAGAGTGAGTACTACTACGTTTGGCAATTCA
ACTTTCGTGAGTTCGATACAAAAGCAAATATTTTTGCAAATGATTCAATCGAATTGCTGATTCAGTCTGGGATTGATTTCAAGAAGAACAATGAA
ATGGGTATTGATGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375496] SGN-U576293 Tomato 200607 Build 2 62 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187264 [Download][View] Facility Assigned ID: FA0AAD22DG04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5