EST details — SGN-E375563

Search information 
Request: 375563Match: SGN-E375563
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180532Clone name: TUS-34-J18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180532 is on microarray TOM1 spot ID 1-1-7.2.19.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C180532 [TUS-34-J18] Trace: SGN-T187330 EST: SGN-E375562 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E375563Length: 675 bp (905 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375563 [] (trimmed) GCTATGTTGGCTCGACAAAGTATTTATACATCTGGAATGACATGAATGAACCTTCCGTCTTCAATGGACCAGAGGTAACAATGCCAAGAGATGCT
TTACATCATGGAGGAGTAGAGCACAGGGAGTTGCACAATTCATATGGTTACTATTTCCATATGGCAACATCCGACGGGCTTCTAAAGCGTGGAGA
TGGAAAAGATAGGCCTTTTGTTTTGGCAAGGGCTTTCTTTGCCGGAAGTCAAAGATATGGAGCAATTTGGACTGGAGATAATACAGCAGAATGGG
AGCACTTAAGGGTTTCAGTCCCCATGGTGTTAACTCTTAGCATCTCTGGAATAGTCTTTTCTGGTGCAGATGTTGGTGGATTTTTTGGTAATCCT
GACGCTGAATTGTTGGTTCGCTGGTATCAATTAGGTGCATATTATCCCTTTTTCCGGGGCCATGCACATCATGACACTAAAAGACGGGAACCTTG
GTTATTTGGAGAAAGAAATACACAATTGATGAGGGAAGCGATACATGTTCGTTACATGTATCTTCCTTATTTCTACACTCTATTTAGAGAAGCAA
ATTCAAGTGGTACTCCAGTTGCTCGTCCGCTTTGGATGGAGTTCCCTGGAGACGAAAAATCCTTTAGCAATGATGAGGCTTTCATGTTTGGGAAT
GGTCTTCTGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375563] SGN-U566569 Tomato 200607 Build 2 32 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187331 [Download][View] Facility Assigned ID: FA0AAD22DE09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0070 Quality Trim Threshold: 14.5