EST details — SGN-C37557
| Search information |
| Request: 37557 | Match: SGN-C37557 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C37557 | Clone name: cLEG-42-G5 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177496 is on microarray TOM1: SGN-S1-1-3.4.7.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177496 [TUS-26-L6] | Trace: SGN-T182731 | EST: SGN-E370117 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177496 [TUS-26-L6] | Trace: SGN-T182732 | EST: SGN-E370118 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259457 | Length: 567 bp (911 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259457 [] (trimmed)
GGGAAACAATTTTTTTTGAAATTTGATATATCCTTGAAACAATCATGTATAAATTACAATATCATATTCCTCCTTTTTCACTTATATATTTTCCA
TCCAAAACTTTTTTTTTTGGGGGGCCTCTTTTGTAAACTTATCTGTGAGCAGTGACCAACGTCTCTATAAACCTCAATCCATCAAATCTGGGCGC
AAATTTATCTGTAGATGTTGATGCTTTCACCGATTTTGAACAATCTTCATCAGTTTTCTTCAAATTATCGTCCTTGTGAAGAGAAATTCGAACTT
TGGATACAGCAGCACCCTACAGATTTTCATTCAAAAGATTTTGAAGTGGCTGTATTAGATTGGTTTGCACAACTCTGGGAAATAGAGAAAGATGA
ATATTGGGGATACATTACTAGTGGTGGCACTGAGGGCAATCTCCATGGCCTTTTGGTTGGAAGAGAGCTACTTCCAAGTGGGATATTATATGCAT
CAAAAGATTCACATTACTCAATTTTCAAAGCAGCAAGAATGTATCGAATGGAGCTACAAACTATCAACACTTTAGTTAATGGGGAAATTGAT
TCCAAAACTTTTTTTTTTGGGGGGCCTCTTTTGTAAACTTATCTGTGAGCAGTGACCAACGTCTCTATAAACCTCAATCCATCAAATCTGGGCGC
AAATTTATCTGTAGATGTTGATGCTTTCACCGATTTTGAACAATCTTCATCAGTTTTCTTCAAATTATCGTCCTTGTGAAGAGAAATTCGAACTT
TGGATACAGCAGCACCCTACAGATTTTCATTCAAAAGATTTTGAAGTGGCTGTATTAGATTGGTTTGCACAACTCTGGGAAATAGAGAAAGATGA
ATATTGGGGATACATTACTAGTGGTGGCACTGAGGGCAATCTCCATGGCCTTTTGGTTGGAAGAGAGCTACTTCCAAGTGGGATATTATATGCAT
CAAAAGATTCACATTACTCAATTTTCAAAGCAGCAAGAATGTATCGAATGGAGCTACAAACTATCAACACTTTAGTTAATGGGGAAATTGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259457] | SGN-U577190 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72218 [Download][View] | Facility Assigned ID: TBFGI39TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0083 | Quality Trim Threshold: 14.5 |
Working
