EST details — SGN-E375627

Search information 
Request: 375627Match: SGN-E375627
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180827Clone name: TUS-35-G1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180827 is on microarray TOM1 spot ID 1-1-8.3.17.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C35296 [cLEG-34-F19] Trace: SGN-T70253 EST: SGN-E254195 Direction: 5' Facility: TIGR
Clone: SGN-C180827 [TUS-35-G1] Trace: SGN-T187394 EST: SGN-E375626 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375627Length: 759 bp (897 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375627 [] (trimmed) GAAGATCTAATGGTGGCAAATATAACTTTCTGGAGCGGCTTTTAGGGGTTGCGCATCTGTTGTCACAGATGGTTGAGCCAGTTTTAAGGGCCGCG
TCGGAGATATCCACACTTCTTGCACGATCATTTTTTATGGGATTTTCGCTGACAGTATTGTCCTTGCTTGCCCGAATAAGAGTTCTAGTTCAGCA
AATTCTTCTAGATGTTGTTTGTGTATTCAACAATGTTTCCTCTTTATCACAGAGGGAACAAGCCATCAAATTGACTCAAGATGGTTTTGAGGTTT
TTAGAGAATATTTTCCGCCAAAGCAGCAGGTGGTCTTCCTCGAATGTATTTGGGAATCTGATAAGTATATGTTAGTTGAGAGACAAAATCAGAAA
GATGTTGGAAGCCAGGAAAAGGATGTTGGAGAAGATGTTTCTGTAGAAGCATCTAAGGTTCAGTATGAAAGCATTGGGCTTTTCCTAGGAGATGA
TGAACCTGGACAGACGGCCTCTAAAGATTCAGCTGAGGATGGTCAAACTATGAAGGACAACGATATAGTAGATTCCTTGGAGGATCCTATCCAAG
ATAGTAATGATGAATCTCAAGCTCAAGTTGATTCAACTATTGCAGAACCTTCTGGAAATAATTTTGATGCTCCTGAAGCCGGAGCCTTTCCAAGT
TCATCACGAGACAAGAATCCTTCAAAAGCCAAACATGGATCAAGAAATAGCGTTGCATTTGTTTTAGTAAAAAGACCCAAACTGTCAACAAACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375627] SGN-U564639 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187395 [Download][View] Facility Assigned ID: FA0AAD23AD01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0072 Quality Trim Threshold: 14.5