EST details — SGN-E375663

Search information 
Request: 375663Match: SGN-E375663
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180985Clone name: TUS-35-M15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180985 is on microarray TOM1 spot ID 1-1-2.1.17.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C36406 [cLEG-38-J4] Trace: SGN-T71320 EST: SGN-E256624 Direction: 5' Facility: TIGR
Clone: SGN-C180985 [TUS-35-M15] Trace: SGN-T1659 EST: SGN-E378583 Direction: 5' Facility: Giov. Lab
Clone: SGN-C180985 [TUS-35-M15] Trace: SGN-T187432 EST: SGN-E375664 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E375663Length: 674 bp (931 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375663 [] (trimmed) AAGAGGAAAAAAAGAACTTCATACTTGCTCAATTATAAGGTAGGGATCAAACCCAAGAAGACACATTCTTTAAAGACTTTGGTTGATACAGTAGT
GCAAGCACAATGGTTATCAACTCTCTAAGGGTATTAATCCTGACACAACCTAATGTTTCATTATAACAGTCGCCGATAATAATGGCGCATCGATA
TATGGTACAAGAAGGCCAAAGCAGAGTATGAACAGATGTCTTGGCAAAAGAAATGTGAGGAAGTCTCTCCTGCAAGCCATTGGACTGTACTACTT
TTGGGTTGGATAAGCAAGTGTAGAACAGTTCCCTTCCAAGTCTATTGTCTCAGCAAAGATCTCTTCTACGATTTCAGAGTACTTCGTGAGTATTT
CCATAAACTGAGGGATAAAATCGTCACACCAGCAATTCCAGCCAGTATCTTTGCATCTCTTGAATAACTTTTGGGTACAGATTGCATCAATGACT
TCAACCTTTTAATACGAGATGCCTGAGGCATCAAAATTACTACAGTATACTGCTTTTTACAAGGGAACGGCAAAAGTTTTTGCAAGGCTAGTTGG
GCAGTTAATGGCGTCAAGATGCTTCTCACTTTGGAACGTGCAGCCTCTTGGATCTTAAAAGAATTGCCAATATCACCAGAATATATCCGTGACTG
GTAACTGCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375663] SGN-U568531 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187431 [Download][View] Facility Assigned ID: FA0AAD23AG08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0015 Quality Trim Threshold: 14.5