EST details — SGN-E375667

Search information 
Request: 375667Match: SGN-E375667
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181019Clone name: TUS-35-O1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181019 is on microarray TOM1 spot ID 1-1-8.3.17.13 [Order] [Tomato Microarray Database]
See unigene SGN-U578456 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C36607 [cLEG-39-G7] Trace: SGN-T71341 EST: SGN-E257655 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E375667Length: 673 bp (867 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E375667 [] (trimmed) CAACAATCTCGCACCGATCCAGTGGTTACTTGTTTTTTATGGACAAGTTATTCGTGTTGAATTGCTTAATATGGCGATGGACAAAGCAACGTTTC
TACTGCTGCACTCCTCAGAGGTACATAATCAATTTTACATTATCAGCATCCATATATTAATTACTTTTCCTCTATAATCACCTACACAGTAATGG
TAATATCTCTAATCAATAGTTGTAGAATCATTCAACAAGCCGCACAAAGCTTACTCTTTTATATGTAGTCACATACAGCTGATTATTGAAGCAGC
TTTAAACTATTTCATAAAATATTTTGGCTGGTCTCCCCTCTCAACTCTATGTTTATATCCAATATAACCATGATTTTTGATAACTTACGGTTCAT
GTACATATTTTTCAAGAACGAATGTATTTCAAAAACGAAAATATTGACACCTTTTAAGTATTAACAACTAAAAGACCAATCGTTAGACCAATTAT
TCTGTGACGCATCAACTTTAAGTTGCGTTAGCTTAAGCCTCGTGCTAGTAATTATTTAGCCGTCTAGCTGTCAAACTTGAACTATTATTTGAATA
TTAGTAGGTTTTTTTCAGGTGAACAAGATTCGCATCTAAAATATGTCATGTAAAAAGCCATCTAAAAATAAGTTCTGCGTAAGAACCATTGTCAT
GGCATAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375667] SGN-U578456 Tomato 200607 Build 2 466 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187435 [Download][View] Facility Assigned ID: FA0AAD23AH01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.946 Expected Error Rate: 0.0137 Quality Trim Threshold: 14.5