EST details — SGN-E375808

Search information 
Request: 375808Match: SGN-E375808
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173214Clone name: TUS-15-I20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173214 is on microarray TOM1 spot ID 1-1-5.1.19.2 [Order] [Tomato Microarray Database]
See unigene SGN-U577319 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C1867 [cLEC-14-C18] Trace: SGN-T26422 EST: SGN-E204806 Direction: 5' Facility: TIGR
Clone: SGN-C173214 [TUS-15-I20] Trace: SGN-T188661 EST: SGN-E375807 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375808Length: 668 bp (903 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375808 [] (trimmed) TGGCACCAATGCAGTTCTGGATGGTTTTGCGGAAGAAATATCCTCAATTTGGCCAGCAGAGCAATGGAGCTTTCATGCAACAGGATGCCGAAGAG
TGTTGGACCCAACTACTTTACACCCTTTCCCAGTCTCTTAAATCACCGAATTCGAGTGAAGGTCAGGATATTGTGAAGACTCTCTTCGGTATTGA
CTTTGATAACAGGATCCATTGTGCTGAAAGTGGTGAAGAAAGCACAGAAACAGAAACTGTCTATTCCCTTAAATGCCACATTTCGCAGGAAGTTA
ACCATTTGCACGAGGGTTTGAAACGTGGTCTGAAATCGGAACTGGAGAAGGCATCTCCTTCACTTGGACGCAGTGCAGTTTATGTGAAAGACTCC
CGAATCAATGGCTTGCCAAGATACTTGACCATTCAATTCGTCCGTTTTTTCTGGAAAAGGGAATCAAATCAGAAGGCAAAGATTTTACGGAAAGT
GGATTACCCATTGTCGTTGGATGTATATGATCTTTGTTCGGATAACCTTCGCAAGAAACTGGAAGGCCCCCGCCAGGTTTTGAGGGATGCAGAAG
GTAAGAAGGCTGGTTTAAAAACAAGTGCAAAAACTCCAGTTACAACTGACAACGACACTAAAATGACCGATGCTGAGGAATCATCTAGTGGAAGT
GGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375808] SGN-U577319 Tomato 200607 Build 2 47 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188662 [Download][View] Facility Assigned ID: FA0AAD3BE10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0033 Quality Trim Threshold: 14.5