EST details — SGN-C37584
| Search information |
| Request: 37584 | Match: SGN-C37584 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C37584 | Clone name: cLEG-42-I13 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177506 is on microarray TOM1: SGN-S1-1-1.4.6.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177506 [TUS-26-L16] | Trace: SGN-T1449 | EST: SGN-E378271 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C177506 [TUS-26-L16] | Trace: SGN-T182669 | EST: SGN-E370055 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177506 [TUS-26-L16] | Trace: SGN-T182670 | EST: SGN-E370056 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259623 | Length: 555 bp (915 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259623 [] (trimmed)
GAGCAGTCCATCGCATTACGGGTGGAGAACTGTTTCGGACGGTGATGGAGTGTCCATATTCGGTGGGAGCCATGTTTGGGTGGATCATTGTTCTT
TGTCCAACTGTAAGGACGGTCTGATTGATGCGATTATGGGGTCTACAGCAATAACCATTTCAAATAATTACATGACACATCATGATAAAGTTATG
CTCTTGGGACATAGTGATACATATACTCAAGATAAAAACATGCAAGTAACTATAGCTTTTAATCACTTTGGTGAAGGTCTTGTCCAAAGAATGCC
AAGATGTAGACATGGTTACTTCCATGTGGTGAACAATGACTACACACATTGGGAAATGTATGCTATTGGTGGAAGTGCTGATCCCACTATCAATA
GTCAAGGGAACCGATTTCTTGCCCCTGATATCAGGTTTAGCAAAGAGGTTACAAAGCACGAGGATGCACCGGAGAGTGAATGGAAGAATTGGAAT
TGGAGGACCGATGGGGACCTAATGTTGAATGGTGCATTTTTTACGCGATCAGGAGTTAGAACTGGTTCATCAAGTTATGC
TGTCCAACTGTAAGGACGGTCTGATTGATGCGATTATGGGGTCTACAGCAATAACCATTTCAAATAATTACATGACACATCATGATAAAGTTATG
CTCTTGGGACATAGTGATACATATACTCAAGATAAAAACATGCAAGTAACTATAGCTTTTAATCACTTTGGTGAAGGTCTTGTCCAAAGAATGCC
AAGATGTAGACATGGTTACTTCCATGTGGTGAACAATGACTACACACATTGGGAAATGTATGCTATTGGTGGAAGTGCTGATCCCACTATCAATA
GTCAAGGGAACCGATTTCTTGCCCCTGATATCAGGTTTAGCAAAGAGGTTACAAAGCACGAGGATGCACCGGAGAGTGAATGGAAGAATTGGAAT
TGGAGGACCGATGGGGACCTAATGTTGAATGGTGCATTTTTTACGCGATCAGGAGTTAGAACTGGTTCATCAAGTTATGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259623] | SGN-U585246 | Tomato 200607 | Build 2 | 318 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72384 [Download][View] | Facility Assigned ID: TBFGI55TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 14.5 |
Working
