EST details — SGN-E375850

Search information 
Request: 375850Match: SGN-E375850
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173060Clone name: TUS-15-C10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173060 is on microarray TOM1 spot ID 1-1-7.3.20.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1341 [cLEC-11-L6] Trace: SGN-T25638 EST: SGN-E201691 Direction: 5' Facility: TIGR
Clone: SGN-C173060 [TUS-15-C10] Trace: SGN-T188703 EST: SGN-E375849 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E375850Length: 639 bp (915 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375850 [] (trimmed) CCTAGGTTGGCTTTCATCATCAGATGTTATTGAAGGATCTGGAGATGGATTGACGTCTGGTTTTAAGTTTCCATGTCCAGCATCCAATGCGCTTG
GAAGTACATCCGCCAGTTGTGATACTTCAAAGCCAAAGGAAACAAACATTTCAACGGATAATTCTGGCATTGAGAATCAATCACTTGGCTATAAT
AGCAGTTCGTGGTCCTCCGAGAAAAATGAATCTGTAAATCTGGGTCATATGCCTTTTTTAAATGGATCAAGTAATTTACAGTGCAAGTTAGTACC
TGATAAGAAGAAGGCTGAGGTACATGGTGGTGGAGTCCAGGTCGAGATTATATCTAATAACCAACCAAGAATCAACGATAATATAGTGGATAGCA
TGCAAAAGAAACACTCCAAGCACCAGAATCGCTCTGAGGGTAAAAGAAAATGTGGTTATCTAGAAAATGGAGACACACTCAATTACACTGATAGC
CTTCCAGAGGAGCAGAAGCTGCCATCTGGGACCGGAAGCACTCACGTGAGTTTCGCATCTGCAGGTGTCCTGCAGCAAAAGCAAGCTCAAGATCC
TGATTTTGGCTACTTGGGTGGTAGCTTCTCTTACATGGATTCAGATTACGGTCATTCCGATGGGAGTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375850] SGN-U574041 Tomato 200607 Build 2 66 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188704 [Download][View] Facility Assigned ID: FA0AAD3BB05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0035 Quality Trim Threshold: 14.5