EST details — SGN-E375895

Search information 
Request: 375895Match: SGN-E375895
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173252Clone name: TUS-15-K10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173252 is on microarray TOM1 spot ID 1-1-7.3.20.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1924 [cLEC-14-E8] Trace: SGN-T26251 EST: SGN-E204635 Direction: 5' Facility: TIGR
Clone: SGN-C173252 [TUS-15-K10] Trace: SGN-T188748 EST: SGN-E375894 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E375895Length: 675 bp (931 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375895 [] (trimmed) ATTAACCACTCAATTGGCAATTCACAAGTTGTTGATTTGACGGATCTGTTTGTGAGCATGACGAACGACGTGCTTTGCAGGGTGGCATTAGGAAG
GAAGTATTGTGATGGGGAAGAAGGGAAAAAATTCAAGTCATTGCTGTTAGAGTTTGTTGAATTATTGGGTGTTTTTAATATCGGTGATTACATGC
CATGGCTTGCATGGGTGAATCGTTTCAACGGTTTAAATGCGAAAGTGGACAAAGTAGCTGAGGAGTTCAGTGCATTTTTGGAAGGTGTAATTGAG
GAACACAAGGAGAAGATCAAAACGGATGAAAAAGAGGAAGGATCAGCAGACTTTGTGGATATATTGCTCCAAGTTCAGAAAGAAAACAAGTCCGG
TTTTAACGTTGAGATGGATTCGATTAAAGCTATTATCATGGATATGTTTTCTGCAGGAACAGACACAACCTCCACTCTTTTAGAATGGACAATGA
ATGAACTCATCAGAAATCCAAACGCATTGCGAAAATTAAGAGATGAAGTGCGGAAAGTAACTCAAGGGAAATCAGACGTAACAGAGGACGATTTG
GAACACATGCCTTATTTAAATGCAGTAATGAAAGAGAGTCTACGTCTTCATTCTCCGGTGCCATTGCTTCCTCGAGAAGCAATTAAGGATACCAA
AGTATTGGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375895] SGN-U573345 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188749 [Download][View] Facility Assigned ID: FA0AAD3BF05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0012 Quality Trim Threshold: 14.5