EST details — SGN-E375916

Search information 
Request: 375916Match: SGN-E375916
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173348Clone name: TUS-15-O10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173348 is on microarray TOM1 spot ID 1-1-7.3.20.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2104 [cLEC-14-N13] Trace: SGN-T26479 EST: SGN-E204863 Direction: 5' Facility: TIGR
Clone: SGN-C173348 [TUS-15-O10] Trace: SGN-T188769 EST: SGN-E375915 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E375916Length: 748 bp (913 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375916 [] (trimmed) ATTTTGTATTATGAAGTCCTCGATATTCCATTACCAGAGCTACAGTGCTTAAAAACTCTCAAAGTCGCCTTTTATAATGCTGCAAAATATGAAGT
GACAATCCATACTATTAGATTGCCAAAACAAAGTACTGTGGATGATGTCCTTAATCATCTTAAGACAAAGGTTGAGTTGTCACGTCCAGATGCTG
AACTAAGGTTGCTGGAAGTTTTCTATCACAAGATATATAAGATTTTTCCACCTACTGAAAGGATTGAGAACATAAATGATCAGTACTGGACCTTG
CGTGCAGAAGAGATCCCTGAAGAGGAGAAAAACCTGGGTCCTCTTGATCGTTTGATTCATGTTTACCATTTTACGAAGGACACAACTCAAAACCA
AGCACATGTACAAAACTTTGGCGAACCATTTTTTTTGGTTATTCATGAGGGTGAGACACTGGCTGAAGTTAAAGTGCGCATTCAGAGAAAATTGC
AGGTTCCACATGAGGAGTTTTCAAAGTGGGCGTTTGCGTTTGTGTCCATGGGCCGTCCTGACTACCTCCGGGATTCAGATATTGTATCTATTCGT
TTTCAGAGGAGAGATGTNTATGGTGCTTGGGAGCAGTATCTGGGATTAGAGCATGCTGACAATGGTCCTAAAAGGTCATATGCTTCCAACCAGAA
TCGACCCACTTTTGACAAGCCTGTTCGGATCTACAACTAGTCTTCTAAATGACTGATCATACCATGGGAGGGAGCATGTAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375916] SGN-U567026 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188770 [Download][View] Facility Assigned ID: FA0AAD3BH05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0112 Quality Trim Threshold: 14.5