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EST details — SGN-E375921

Search information 
Request: 375921Match: SGN-E375921
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173362Clone name: TUS-15-O24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173362 is on microarray TOM1 spot ID 1-1-1.3.19.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2139 [cLEC-14-P13] Trace: SGN-T26484 EST: SGN-E204868 Direction: 5' Facility: TIGR
Clone: SGN-C173362 [TUS-15-O24] Trace: SGN-T188776 EST: SGN-E375922 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E375921Length: 676 bp (892 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375921 [] (trimmed) CCCCCAATAAGATATAAAATATATATGATTAATTACAATATTTGTTCCTATGCATTTTTATTCACAGACAAACCTCCTGAGAGGTATGTATTTTT
ATATATATATATATATATATAATAAAACTATAATGTAAAAATAAACAGTTAATAAAACAAAAATATACATGTCCCTCACCTAATTATTATTATTA
TTATTTTTTCACTAAATCTATAAATCATTTAATTTAAAACCAACAAAATCTCAAATACCCAAATCCAGCAATCCCACTAATTTAATTTTAACACA
CTCGTTAATCAATCTTAATTAGTTAGGATCCTGTAATAATCAAACACCTTTAATTTGTATGGTATAATAATATCGTATATTTTTTTTATATTATA
ATTCGATATTTTAAGAGTACCAATTCATGCCTGAATAAGGTTGTCGAAAAACTCCTTCACTTAAAGACCCAAAAACTTGTTGTTGACTGAAAAAA
CTTACGATAGATCCATTTTGTTCATCTGCTCGAGCATTCATATTTAATCCATCTTCCATATTTTCTGGCAAAAACCTTTTTGTTGATTGAGAATT
ATCGTTACTAGCTCCTCCATCTTGATCATTCCAATACAAATTTGCTAGTGGCCTTTTTGAAGAATATTGTGATCCACCTTCATATAAATTTTGGT
CATTTTGATCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375921] SGN-U568609 Tomato 200607 Build 2 36 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188775 [Download][View] Facility Assigned ID: FA0AAD3BH12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.892 Expected Error Rate: 0.0160 Quality Trim Threshold: 14.5