EST details — SGN-E375941

Search information 
Request: 375941Match: SGN-E375941
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182668Clone name: TUS-40-C18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182668 is on microarray TOM1 spot ID 1-1-7.3.5.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C118638 [cTOB-13-L22] Trace: SGN-T132127 EST: SGN-E321216 Direction: 5' Facility: TIGR
Clone: SGN-C182668 [TUS-40-C18] Trace: SGN-T187836 EST: SGN-E375942 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375941Length: 692 bp (902 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375941 [] (trimmed) GCTTTAACTTATTTTTTGGTTTTAGGTAACAACATTTTAGTACATTGGCTGTCACGCTTTAGTGCTAGGACAAGTTCCATTTTACTGATATAGTG
ATGAGGTAATCATTGGTATAGATAATGAAGAATCAGAACATGAGTCAGATACAGAAAAATAAAACATCTAAGGTTCATAGTAGAGCTTTTATGCA
GAAATGTTGTTTCTTAGATGGAAGAAATAAGGCCCCTCTCGTTGAAGAATGTGACACAATCATCAAACATCTCTTCGATGGACTTGAATTTCATT
CCTAAACCCTCCAGCTTCAACGTGTTGAAATCATAGGAAGGTCGATCCAGTTCCTTAAACCTTTTAGGAATAGGTAACGATGGATAGCGTTCTGA
TAGAACTGAGACAAGTTGATTGTTGTCAAGAACCTTTGAGCTGCAAAGGTACCTCCCGTGAGCACTTGGATGCTCATAGACAAGTATATGGGACA
GAGCTACGTCATCTATGTGAACATAACCCATCCTTCCATGGAAATCAAACTTATCTGTCTTTCCTTTAAGCAAACCTAGGACATCATCTGCTGTT
GAACATAAATCTGGAGGCAAACTAGGCCCAATGATAAAAGAGGGGAGTAGTGTCACAAGATCAATGTTGTTTTGCTCACAGAATTCCCAAGCAGC
CTTCTCAGCCAGCGTCTTTGATAGAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375941] SGN-U584875 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187835 [Download][View] Facility Assigned ID: FA0AAD28BB09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0038 Quality Trim Threshold: 14.5