EST details — SGN-E376040

Search information 
Request: 376040Match: SGN-E376040
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182722Clone name: TUS-40-E24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182722 is on microarray TOM1 spot ID 1-1-1.1.5.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C119107 [cTOB-15-M23] Trace: SGN-T132476 EST: SGN-E319509 Direction: 5' Facility: TIGR
Clone: SGN-C182722 [TUS-40-E24] Trace: SGN-T1745 EST: SGN-E378612 Direction: 5' Facility: Giov. Lab
Clone: SGN-C182722 [TUS-40-E24] Trace: SGN-T187935 EST: SGN-E376041 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E376040Length: 443 bp (869 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376040 [] (trimmed) AACATCATATTAGCATGCATATATATATATATATATTTATTTACACAGTTACACAAATGAGTAGTTTGAAAACAGTACTTTCCGAAGGAGAGGTG
AGTGGTGACGGATTCTTGTGTAGTTATTCTAAACAGAGCTGCTCATGTATTTTTATGCTGGGTGGGGAGATGTAATGAGATGGGAAGTACGGTTT
GATGAGCAATGAGGCCAGAGAAATGCACCGATACCTAATTTTTGCTTGTTAACCAAGTCGCCTTTAGCAGGTTAACCATATTCAGCAAGAAGCTT
GTCTATCATCCTTTCAAGCATGTGCTGGTAGTTCTCTTTGGTGTACCTTGGATCGTGCACAGGTATTTGGAAGTGGTTTACTTCCCTCTTTTTGT
TCACATTCATCTCTCCGCCTATAGTGAGCCTGCACCCCGGGTGGATTCACTACTTTTACAGCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376040] SGN-U586340 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187934 [Download][View] Facility Assigned ID: FA0AAD28BC12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0276 Quality Trim Threshold: 12.5