EST details — SGN-E376061

Search information 
Request: 376061Match: SGN-E376061
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182850Clone name: TUS-40-K8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182850 is on microarray TOM1 spot ID 1-1-1.3.6.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C127861 [cTOC-3-G13] Trace: SGN-T136475 EST: SGN-E323902 Direction: 5' Facility: TIGR
Clone: SGN-C182850 [TUS-40-K8] Trace: SGN-T187954 EST: SGN-E376060 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E376061Length: 637 bp (910 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E376061 [] (trimmed) GTCACAGTTACATTCTCTCTTGCCCTCCCGCCGATCAGAGCCATTCTCTTCAACAATTTCAAGAGATGGGTGAAACACCAGTTCCAGAGTCAGTT
TTGAAGAAGCAGAAGAGGAGCGAGGAATGGGCTCTTGCAAAGAAGCAAGAACTTGAATCTGCAAAGAAGAAGAATGCTGAGAACAGGAAATTGAT
CTACAACAGGGCAAAGCTGTATGCAAAGGAGTATGCAGAACAGGACAAGGAATTGATCCGTTTGAAACGTGAGGCTAGATTGAAAGGTGGTTTCT
ATGTGGATCCTGAGGCAAAGTTGTTGTTTATCATCAGAATACGCGGTATTAACGCTATGCCCCCACAGACCAAAAAGATTTTGCAGCTACTACGT
TTGCGCCAGATCTTTAATGGTGTCTTTTTGAAAGTCAACAAGGCCACAGTGAACATGTTGCATAGGGTTGAACCTTACGTTACCTATGGTTACCC
AAACCTAAAGAGTGTTAGGGAATTGATCTACAAAAGAGGTTACGGAAAACTTGACAAGCAGAGAATTCCTTTAACCGACAACTCTGTCATTGAGC
AGGGATTGGGCAAACATGGAATTATCTGTGCTGAAGACCTTGTCCACGAGATCATGACTGTCGGGCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376061] SGN-U580567 Tomato 200607 Build 2 60 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187955 [Download][View] Facility Assigned ID: FA0AAD28BF04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5