EST details — SGN-E376113

Search information 
Request: 376113Match: SGN-E376113
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185745Clone name: TUS-48-C23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185745 is on microarray TOM1 spot ID 1-1-2.3.7.12 [Order] [Tomato Microarray Database]
See unigene SGN-U570976 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C185745 [TUS-48-C23] Trace: SGN-T1898 EST: SGN-E378482 Direction: 5' Facility: Giov. Lab
Clone: SGN-C185745 [TUS-48-C23] Trace: SGN-T188152 EST: SGN-E376112 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E376113Length: 551 bp (864 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E376113 [] (trimmed) CCGGGCAGGTATCTGCAGCGAAGATGGAGGCAGCAAGAAGTGTGAAAGATGTTTCCCCCCATGATTTTGTCAAGGCTTATGCCGCTCATCTCAAG
CGCTCCGGAAAGATGGAGCTTCCTGAATGGACTGATATAGTTAAGACTGGTAAGCTAAAGGAGCTTGCCCCATATGATGCTGATTGGTACTACAT
CAGAGCTGCCTCCATGGCAAGGAAGATCTATTTGAGAGGAGGTATTGGTGTTGGTGGTTTCCGAAGAATCTATGGTGGAAACCAGAGGAATGGAA
GCCGTCCACGTCACTTTTGCAAGAGCAGTGGTTCAGTTGCACGCCACATTCTTCAACAGTTGCAGACGATGAACATCATTGACTTTGAGCCTAAG
GGCGGAAGGAGGATCACATCCAGTGGTCAGCGGGATCTTGACCAAGTTGCCGGAAGAATTGCTGTTGCTTGTTAAGAGAGAGATGAGTTCATTCA
ATTTTATGAATACATGAGTTAGCTCAAACTTATTGTTTCTGTTTGGACCTAAATAGATTTAGGGTATTGTTGAACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376113] SGN-U570976 Tomato 200607 Build 2 59 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188153 [Download][View] Facility Assigned ID: FA0AAD36AB12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 0