EST details — SGN-E376228

Search information 
Request: 376228Match: SGN-E376228
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185889Clone name: TUS-48-I23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185889 is on microarray TOM1 spot ID 1-1-2.1.7.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C16364 [cLED-16-E14] Trace: SGN-T52468 EST: SGN-E235895 Direction: 5' Facility: TIGR
Clone: SGN-C185889 [TUS-48-I23] Trace: SGN-T188267 EST: SGN-E376227 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E376228Length: 676 bp (874 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E376228 [] (trimmed) AGGTACACAACATAGGCAGAAGTGAAACATCTAAACACAAATAAACACGAGTTTATTCTTCATCTTCCTCGTCTCCATCACCACCAGCTGCTTTC
TTTGCAGCAGATTTCTGGTTCTTTCGCTTCACTCTTCCAGGGCGACCACCACCGAAAGGACTGGTGAGAGAGAAGTCAATGTGCTTCTGGGAGTC
CACTCTCACCATGAAAGAAGCAACGTTCACCACCTGCCTACCAACTCTGATATGCCTTTGTCGAATGAGCACTCTAGCATGGTGGATTGACTTAG
CCATGCCAGTCTTGAAGACGAGGGTTTGGAGACGACGCTCAAGAAAGTTCTCCACAGTGAGGGCCAAGACATAATCAAGCTTGTTCTGGCTCTCA
TCCAATAATCCATATCTGTTCATTCTTCTCAAGAGTGCTTCACCTTCAAAAATACGGCGTGGATCTTTCTCATCCAAGGTCAGAAGCATTCTTGC
GGCATTTCTGATACGGCTCAAGGCATACTGAACTCTCCAAAGCTCTCTCTTGCACCTCAGCCCATATTCTCCAACAAGCTTCAACTCTGCATCCA
ATCGCTCCTTCTCATAAGGGCGTCGAGGCTTCTTAAAGGTCTTCCCATAGTTGCGGTAAAAGGAAACATGCACCATACTTGCCGGTCACTGGCAC
CGACCTGCCCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376228] SGN-U577210 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188268 [Download][View] Facility Assigned ID: FA0AAD36AE12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 0