EST details — SGN-E376238

Search information 
Request: 376238Match: SGN-E376238
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185963Clone name: TUS-48-M1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185963 is on microarray TOM1 spot ID 1-1-8.1.7.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C73979 [cLER-7-F11] Trace: SGN-T93467 EST: SGN-E281004 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376238Length: 684 bp (867 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376238 [] (trimmed) CGGGCAGGTACAAGTGTTCACCCCCTATAGTTCTTTCGAATCCACAGACCTCAAGGAACTCGATACCTCCTCGTAGGTGGCCAACCCTCGCCTGG
AATGCAGTATTGCTGATTCTAATTTTGCGGTATTTCTCCTCATCAGGATTCGTAGCAATATTCCTAACAAACATACGCAGTGAGTTGAAAGCTTG
CATGACTTTGGCCGCGTCATCCATGGAATTCTGCTGGATAGTCCGCAGGCACTCAGCCATCTGCTCGACCTTTGCAGCTAGAGTCAATGAACTCT
GTCCTTCCTGTAAAACAGGTCTCGAAGGCAAACCAAGCTGCTGCTGCTGCCTTCTTGCTCCCTCTGAAGTATCAGCCTCGTCCAAACGATCAATA
GCTACTCTCAGCATCTGACGAATGTTAGCTCTGTTTCTTCTTGCTGCCTCTTCCGTCACCTCTGCTGTCCTATCATAAAATTCAGTATGCCCAGA
CTTTCTTGAATGTATAACGCTCTCGGTTTCGCAGGAACATTTGTGACCGCAATTATAGCAAACAATAAAGCGAATGGCTTCTTGGGACTCGTAGT
AGTTGGTGTGACAAAACTCCTGTGCGTGTTGCTGAGCTTCTGCAGCAGATCCAAGCAAAGTCCCACGATCGCCGCACTGCAACCTCGGCCCCGAG
GTACCACACAAAATCCAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376238] SGN-U568885 Tomato 200607 Build 2 40 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188278 [Download][View] Facility Assigned ID: FA0AAD36AG01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 0