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EST details — SGN-E376438

Search information 
Request: 376438Match: SGN-E376438
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173855Clone name: TUS-17-D13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173855 is on microarray TOM1 spot ID 1-1-4.4.17.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C5709 [cLEC-32-M1] Trace: SGN-T29800 EST: SGN-E207587 Direction: 5' Facility: TIGR
Clone: SGN-C173855 [TUS-17-D13] Trace: SGN-T189051 EST: SGN-E376437 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376438Length: 657 bp (917 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E376438 [] (trimmed) GGGAGAGTCATTCCCTACCGCCGTTTACTTATCTCTTATCCCCATCATCGGTGGTTGTGGTCTTTCTGCGCTTACAGAGTTGAACTTCAACTGGA
TTGGTTTCTCGGGTGCTATGATCTCGAATGTGGCATTTGTCTTCAGAAATATATTCTCCAAGAAGGGTATGAAGGGGAAGTCTGTTAGTGGGATG
AACTACTATGCTTGCTTGTCTATGCTGTCTTTGTTGATTCTCACACCATTTGCCATTGCTGTTGAGGGACCACAAATGTGGGCTCTAGGATTTGA
AAAGGCTGTCTCTCAAATCGGTCCCCAGATCGTCTGGTGGATGGCGGCCCAGAGTGTATTTTATCACCTCTACAATCAAGTTTCGTACATGTCTT
TGGATGAGATCTCTCCTTTGACGTTTAGTATTGGAAACACCATGAAACGTATATCAGTAATCGTCTCTTCCATCATTATCTTCCGTACACCCGTC
CAGCCAGTCAACGCTCTTGGAGCTGCCATTGCGATTCTTGGAACTTTCTTGTACTCACAGGCAAAACAATGAAGAGTGGGGATTTGCATACCGCG
TTAGGGATAAAAGACGTTGAAGAGAACCTTGAGGTGTTGCGAATGACGTCTCTCAGGATCCTCAGTCTACCCTTACTTTGGGTTGAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376438] SGN-U581521 Tomato 200607 Build 2 25 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189052 [Download][View] Facility Assigned ID: FA0AAD5CB07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0039 Quality Trim Threshold: 14.5