EST details — SGN-C37646
| Search information |
| Request: 37646 | Match: SGN-C37646 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C37646 | Clone name: cLEG-42-L10 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177539 is on microarray TOM1: SGN-S1-1-8.2.7.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177539 [TUS-26-N1] | Trace: SGN-T182598 | EST: SGN-E369984 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177539 [TUS-26-N1] | Trace: SGN-T182599 | EST: SGN-E369985 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259756 | Length: 580 bp (940 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259756 [] (trimmed)
TTAAGCCTGTAGCTTTGGCATCTGATCTGTCAAAAGCTGCAAGAGCAAAAAAATTGCTTCGGAAGAAAGAAATGTTAAAGGAAGCAAAAAAAGCT
GCAGCTTTGGCTGCTGGAGCTGACTGGAAAAGTGACGATTCGGACAGTGAGTTTCCTGAGGAGCACGTATACCGGGAGCCTCCACTACCAGATCT
TCTAAAAGACGAGGAACACCTGTGCCTTATTGTAGATCTCTGCAAGGCTTTAATATCCTTGCAAAGGTATTGGGATGCACTTGAGATCATTAATC
TGTGTCTAAAATTGGCATCCAGCACATTGTCTGTTGAGAAAAAAGAGGAGCTGCAAGCTCTAGGAGCTCAAGTAGGATATAACATTGCTGATCCC
ATCCATGGGTTCGATTGTGCACGTTCCATTGTCAGTCAGCATCCTTACAGCTTTGCAGCATGGAATTGCTACTACAAAGTAATATCAAGACTAGA
TAATCGGCATTCGAAACATAGCAAGTTCTTGAACCATATGCGTGTCAAACACAAAGATTGCATACCACCAATTATTATTGCTGGTCATCAGTTTA
CCACGATCAG
GCAGCTTTGGCTGCTGGAGCTGACTGGAAAAGTGACGATTCGGACAGTGAGTTTCCTGAGGAGCACGTATACCGGGAGCCTCCACTACCAGATCT
TCTAAAAGACGAGGAACACCTGTGCCTTATTGTAGATCTCTGCAAGGCTTTAATATCCTTGCAAAGGTATTGGGATGCACTTGAGATCATTAATC
TGTGTCTAAAATTGGCATCCAGCACATTGTCTGTTGAGAAAAAAGAGGAGCTGCAAGCTCTAGGAGCTCAAGTAGGATATAACATTGCTGATCCC
ATCCATGGGTTCGATTGTGCACGTTCCATTGTCAGTCAGCATCCTTACAGCTTTGCAGCATGGAATTGCTACTACAAAGTAATATCAAGACTAGA
TAATCGGCATTCGAAACATAGCAAGTTCTTGAACCATATGCGTGTCAAACACAAAGATTGCATACCACCAATTATTATTGCTGGTCATCAGTTTA
CCACGATCAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259756] | SGN-U584048 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72517 [Download][View] | Facility Assigned ID: TBFGL65TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0025 | Quality Trim Threshold: 14.5 |
Working
