EST details — SGN-E376497

Search information 
Request: 376497Match: SGN-E376497
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174143Clone name: TUS-17-P13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174143 is on microarray TOM1 spot ID 1-1-4.4.17.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7096 [cLEC-37-M22] Trace: SGN-T31373 EST: SGN-E208382 Direction: 5' Facility: TIGR
Clone: SGN-C174143 [TUS-17-P13] Trace: SGN-T189112 EST: SGN-E376498 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E376497Length: 527 bp (937 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376497 [] (trimmed) GAGAGAAGATGGGCAAAATCTATAATATGGAGAAGTAAACACTCAACAAAATTGAGCCCTCAAGACATATATACTTCTCTATTTGAGAAGGATGG
GATGGGAAAGTAATAAAAACTTATTTGTCTTCTTATGTAGGATTTCTAAGGAAAATAAAATGCAGAGGAGGAGAAGGGAGAGCCACCATATACTA
AAAACACTATACAAGAAGAAACAACTTATAAAGCACAAAGAGGAAGGTGCTGCATCTTGCCACCATTCTTCACTATATTCTACAACTCCCACATA
TCTCCCTCTTTGTCAAAACAATGGTGTGATTGATCAAAAACACCATTTGCTTTTCATCTGAGAGCATTCACAAAAGCCAGCAAGGAGTCTACGTC
CCTCTTCTCTGAAGGGTACTTAATGGCCTTTGAAGAGTGCTTTGGGAAGAAAATTATTGTAGGGAAGCTGCCATGCTGAAATTCTTTTTGTGCAA
ATGCTTTCTGGTCACCATTTGCCCTGAATTTCCCTACTTTCACACCAGAACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376497] SGN-U580331 Tomato 200607 Build 2 71 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189111 [Download][View] Facility Assigned ID: FA0AAD5CH07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0122 Quality Trim Threshold: 14.5