EST details — SGN-E376568

Search information 
Request: 376568Match: SGN-E376568
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174162Clone name: TUS-18-A8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174162 is on microarray TOM1 spot ID 1-1-1.1.16.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7134 [cLEC-37-O23] Trace: SGN-T31183 EST: SGN-E208192 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376568Length: 584 bp (911 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E376568 [] (trimmed) GGGATAAGAAGCCAATAAGGGTTTTCTCTTCTCAATTTCTCTCTTCTTTTTCTTCTCTACAGAGAAAGAGAGAGTTGCTCAAAGAAAATCTCTTC
TTCTTCTTCTTCATATCCCTTTTGGGGTTGAAGAAAAAAGAAGGAAAGAAACAGAGAGAGAGCGACAAAAAACCCTTTTGTATTCCAATTTTTGG
ATACATATATTACCCATCCTTCTATACATATCTTTTTAAGGGAGTTTTTTTTTTACTTTTTAACAATGGATTCCGGTTCTTCTGCTTATTTGTCA
ATGGTGGATCCTTTCTTGGTTGAAGCCCTTCAAAACCCACGTCATCGTCTTACCATTCTAAGAATGGAACTCGACATTCAGAAGTTCTTGCAAAG
TTCCGACGTGCAACAGTTTGAGTTCCCACATTTTCCGACTTCCTACCTTCGTCTTGCTGCGCACCGTGTTGCTCAACACTATGGTTTGCAGACTA
TGGTTCAGGATAATGTTGTGGATGGTCAGGGAGCCAAAATCCTGGTGACAAGAAAACCTGAAAGCAAATACCCTGCTGCGCGTTTATCGGACGTC
CCCCCTAAACAATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376568] SGN-U583622 Tomato 200607 Build 2 85 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189182 [Download][View] Facility Assigned ID: FA0AAD6BA04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0098 Quality Trim Threshold: 14.5