EST details — SGN-E376603

Search information 
Request: 376603Match: SGN-E376603
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174454Clone name: TUS-18-M12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174454 is on microarray TOM1 spot ID 1-1-5.1.16.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23068 [cLED-4-G20] Trace: SGN-T49246 EST: SGN-E231477 Direction: 5' Facility: TIGR
Clone: SGN-C174454 [TUS-18-M12] Trace: SGN-T189218 EST: SGN-E376604 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376603Length: 745 bp (934 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376603 [] (trimmed) CTGCTGGTAACTGGATTTAACAAGTTGAACAAAATCGTATGTTCTTGACCTCTTACAAATTTATCTATAGCGGTAAATCATAATTGAATATTCGT
ACGTAAATCAGCATAAGATTTCACATCGATTTTCCAACATTTGTCTACATATTGCCTTTCTTATACTTGATCAAGAAACATTATCTAGACTTTAA
ACCCCCAATTTTTGGTTGTTGTGTGACATCTTCTATTAGTTTTGTCAAATTAATGTGAGATGAACCTCCTTCCTCCACAGCCTTTGTTGCCATAT
CTGCAAGCCCTTTAGCTCTTTCTCTTCTCATTTTTGCTTCCTCTTCTTCACCCATTAATCTTTCAATAACCATCTTAATATCATCTTTCTTCACT
TGTGCACATCCTTTTTCATCCTCTAAAAACATCACTGGATTCTCCATACCACCCTTCACTCCTGTCTTGAGTACATTCACAATAAGCTTCTCATT
ACAAAATTGTTCAGAAAATAATGGCCAAGTGATCATTGGGACACCAACCGATATCCCTTCTAAGATCGAGTTCCATCCACAGTGTGTCAGGAATC
CTCCTATCGAAGGATGAGATAGTATTAGTACTTGTGGTGCCCAACCATTGATTAAAATCCCTTGTTTTTGAACTCTTTCCTCAAAGTTCTCTTCA
TTTAGCCATTTTCTAAATCCATTTGATATGTGTCTAATGACCCATACGAAGGGTTGTTTAGATGACTCTTACCCCAGTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376603] SGN-U580322 Tomato 200607 Build 2 38 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189217 [Download][View] Facility Assigned ID: FA0AAD6BG06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.942 Expected Error Rate: 0.0044 Quality Trim Threshold: 14.5