EST details — SGN-E376610

Search information 
Request: 376610Match: SGN-E376610
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174504Clone name: TUS-18-O14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174504 is on microarray TOM1 spot ID 1-1-3.3.16.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23136 [cLED-4-J2] Trace: SGN-T49526 EST: SGN-E231757 Direction: 5' Facility: TIGR
Clone: SGN-C174504 [TUS-18-O14] Trace: SGN-T189223 EST: SGN-E376609 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E376610Length: 694 bp (917 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E376610 [] (trimmed) CAGAGCAAAAGGCTCTATCTTCTTCCTTCTTCAATTTCTTCATCAATCAAGATTTTCAACAATGGCGCAAACACTAGCAACTCCTGTACTTCCTT
CTCTTTCCCTTATCTGCAACACATCTTCCATCTCCAAGCACAGTTCCCTCTCTTTTTCTACTCCCACATCTTTTCCAAAGACTGCAGGTTTGGTT
ATAAAGTGTGTGCGTGTGGGAGGAGTGGAAGTTCCAAACAACAAAAGAGTTGAGTTCTCTTTGCAATACATTCATGGAATTGGCCGCACCACTGC
ACGCCAGATTCTGGTAGACCTTCAAATGGAGAACAAAGTGATGAAAGACATGTCGGAAGAGGAACTTATCACTCTTCGTGAAGAAGTCTCTAAGT
ACATGATTGAAGGAGACCTTAGGAGATTCAATGCTCTTGCCATTAGGAGGTTGAAGGAGATTCAGTGCTATAGAGGAGTAAGGCACATCCAAGGA
TTGCCTTGCAGAGGACAACGAACAAAGAACAATTGCCGTACTTTGAAGGGCAAGAAAGTAGCAATTGCAGGGAAGAAGAAGGCACCTCGTTAAAT
CAAGATCGATTTTTCATTTCTTTTGGTAACTAACTTGTAAAAGTTACACTCTATATTCCTATGGCAAACTGTGCATTTGTTTGTTATAAACAGTT
TTTTTCATTGAAATCATTTTTCTCATTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376610] SGN-U566487 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189224 [Download][View] Facility Assigned ID: FA0AAD6BH07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0036 Quality Trim Threshold: 12.5