EST details — SGN-E376686

Search information 
Request: 376686Match: SGN-E376686
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174558Clone name: TUS-19-A20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174558 is on microarray TOM1 spot ID 1-1-5.1.15.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23217 [cLED-4-M8] Trace: SGN-T49266 EST: SGN-E231497 Direction: 5' Facility: TIGR
Clone: SGN-C174558 [TUS-19-A20] Trace: SGN-T1319 EST: SGN-E378746 Direction: 5' Facility: Giov. Lab
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Sequence 
Sequence Id: SGN-E376686Length: 577 bp (869 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E376686 [] (trimmed) CAGCACATTTCATCATACTATACTCTTTACTATAATATTATCCTCTCTATTTTTCATTATCATTAACAATATGGAAATGGTTAGCAAAATTGCAT
GCTTTGTTCTTTTGTGCATGGTAGTGGTTGCACCCCATGCAGAGGCATTAACTTGTGGTCAAGTTACTGCTGGCTTGGCTCCTTGCCTCCCTTAT
CTTCAAGGCCGTGGCCCTCTAGGAGGCTGTTGTGGTGGTGTTAAGAATCTGTTGGGTTCAGCCAAGACTACCGCGGATCGAAAGACAGCATGCAC
TTGCTTGAAATCAGCTGCTAATGCTATAAAGGGAATTGATTTGAACAAAGCTGCTGGTATTCCTAGTGTTTGTAAAGTTAACATTCCTTACAAGA
TCAGCCCCTCCACTGACTGCTCCACGGTTCAGTAAAGTTGATCATCAGAATATGGAACCATTTGAGGAGAAGTTATAAGAATAAGATGAATGGAG
TGTGATCCTGCTTATGGATCCATTAGTTATATGTTGTGTTTGCTGCCTTTTTGTTTCTTTTTTCGTTTTGCCTTTTGGGGGTCTTGTATCGAAAC
TTCACTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376686] SGN-U580253 Tomato 200607 Build 2 49 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189300 [Download][View] Facility Assigned ID: FA0AAD7BA10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5