EST details — SGN-E376809

Search information 
Request: 376809Match: SGN-E376809
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174673Clone name: TUS-19-F15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174673 is on microarray TOM1 spot ID 1-1-2.2.15.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23391 [cLED-5-E18] Trace: SGN-T49620 EST: SGN-E231004 Direction: 5' Facility: TIGR
Clone: SGN-C174673 [TUS-19-F15] Trace: SGN-T1323 EST: SGN-E378354 Direction: 5' Facility: Giov. Lab
Clone: SGN-C174673 [TUS-19-F15] Trace: SGN-T189424 EST: SGN-E376810 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376809Length: 740 bp (919 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376809 [] (trimmed) GCTGAAAATGATTGATATACTTCATAAGGAATAAGCATGAAAACATGGAGAGGGTACAAAAATAGAGGTCACTTTACAGAAGCTAGGCCATTTTA
AGATGTCTTACCAATTCAGCTAGGTTATAACTCGAAAGAATAAAAGAAAGTTTTCAGCATATAATCAGTGACGCGAAAAGGAGGATAGCTAAATC
CTAGAATTGGCAAAAGAAGAGAGAAGTCATACTGCTTTAGCTGTATTGTGCTCTTCCCCAAGTGTTGCCAGCCTTCGCTTAGCTACCTTGGACCT
GTAACACCATACTTCAAATGCCTCGGTGAGGTCTGGATATCGAATCTGTTGATTTTCCAACCACTCTGTTAAAATGTCTGTCTGATCAACTGACG
GCAATGTAAGTATAATAGCAACAAATGCTGACTCCAAAGATTGCCATATCTCACTATCGACTTTTAGTGTGATCTCATCCTCAGTTTCCTCGGTG
ACGGAATCGACTAAAGGCTTCATTGTCCGGACAAAAGGAAGCCAGAGCTTCACCATGTGAAGTCGTTTTACTGTAGGTAACACAACTATGCCATA
GCCTATTGCCTCTAACACTTTTGCGGTCACCTCAAGAACCTTCAGCTTTGTCTTCAGAATTTGATTTTCTTCATCTTTTTGTTGAACGATGGTTA
CTAGCTTCACTGACAACTCCGTCCAGCTGCAAACAAAATCTCTGATAATCTCCAGCTTCCCTAATATCTGACATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376809] SGN-U570819 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189423 [Download][View] Facility Assigned ID: FA0AAD7CC08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0029 Quality Trim Threshold: 14.5