EST details — SGN-E376827

Search information 
Request: 376827Match: SGN-E376827
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174765Clone name: TUS-19-J11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174765 is on microarray TOM1 spot ID 1-1-6.2.15.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23536 [cLED-5-K24] Trace: SGN-T49815 EST: SGN-E231199 Direction: 5' Facility: TIGR
Clone: SGN-C174765 [TUS-19-J11] Trace: SGN-T189442 EST: SGN-E376828 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376827Length: 731 bp (932 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376827 [] (trimmed) TTTAGACCAAATGAGTACTATATATATATATATATGACAATCAAAGGTTACAGAATTAGATGAATTGAAGTCATGTTGCACAATACAAGAAGGAT
GCAGGACATCGAATATCGAATAACTATATGTTGCTACCAGAAACTTTATGATCCTCGATATCAAGAGATAATCCTGATGTATGATTAAATTGGTC
CCTCATCATAAAAACTGAATGTGGCTGCTGGTATGGTGGGCTCACGCTTGATTCCAATATCTGATGTGGAAGTGCCACGTTGCCCACTCGTTGTT
TCTTTGAGGAACTCTCCCCGTTAGGGCTCTCCATTAGCGAAGTTTCTTGGCAATCAGAGTCTGGACTGAGAGGAGAATGATGTGAGGAGAATGAT
TCGTCCATAGAAAGGCTCTTGGTTGAGGTATGTGCATTTACAGGCTTATCAACATGAGGAGCCTCAGATGACGGTGCAGGAGTTCCTGGATCAGT
CCTGCTATCAGATTCTGGGCCGTTGTCACCAGTTGGAAGAGCAGTGACCCCAGAACCAGGAACGTCTGAAAGAACTCCACTCAACCGCTGTTGCT
CTTCGATTATTTTCTTCAAATACTTACCTTGAGCTTCTATTCTAAGTTGTAGCTGTTTCTGCACCTCCAGTTGTTCATGCAGTCTCTTTTGCACC
TCCATCTGCAGCTTTAGAGCCGTAGTGATTTCCACTCCTGATGACCCATCCAAACTTGAAAGCATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376827] SGN-U576104 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189441 [Download][View] Facility Assigned ID: FA0AAD7CE06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.982 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5