EST details — SGN-E376925
| Search information |
| Request: 376925 | Match: SGN-E376925 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C174941 | Clone name: TUS-20-A19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C174941 is on microarray TOM1 spot ID 1-1-6.1.13.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C174941 [TUS-20-A19] | Trace: SGN-T1332 | EST: SGN-E378251 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C174941 [TUS-20-A19] | Trace: SGN-T189681 | EST: SGN-E376926 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E376925 | Length: 575 bp (890 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E376925 [] (trimmed)
TCCCTTCGACCTGATTTTGCTTGGAAAAAGGATGAGTTTATGAATGGTTGCAGTCCTTTACATATAGCATGCAGTAAAGGTCACTTAGATATAAC
AAGAGAATTGTTAAAGCTTGATATGGATCTTTCTGGTTGACAAGATAATGAAGGCAGAACTCCACTTCATTGGGCAATCATCAAAGGAAGAGTGA
ATATTATAGCTGAAATACTCTCAGTGAGTCTTGAATCTGCTGAAATGACAACAAAACATGGTGAGACAATTCTTCATTTGGCTGTAAAGAACAAT
CACTTTGAAGTACTCAAGTTCTTGATGGAGTCTCTTGATGTTTCAAACCTCAAGAATTTTCAAGATGCTGATGGAAACACCATTCTACATTTGGT
TACTGTTAGGAAACTCACCACTGAAATTAATGGTGGCAACGCACAAAGTAATGTGGATTTCTACATTATTTATGACATCAGCTTATATAGCTGCA
ATATGGTCAATATTGCCCCAAGGGAAGGGGGGATCATTGGGTGCTAAGTGAGGTTGTGATCATAGGGGGATGGCTGTGTTTTTATGTTTGGGGAT
TTTGT
AAGAGAATTGTTAAAGCTTGATATGGATCTTTCTGGTTGACAAGATAATGAAGGCAGAACTCCACTTCATTGGGCAATCATCAAAGGAAGAGTGA
ATATTATAGCTGAAATACTCTCAGTGAGTCTTGAATCTGCTGAAATGACAACAAAACATGGTGAGACAATTCTTCATTTGGCTGTAAAGAACAAT
CACTTTGAAGTACTCAAGTTCTTGATGGAGTCTCTTGATGTTTCAAACCTCAAGAATTTTCAAGATGCTGATGGAAACACCATTCTACATTTGGT
TACTGTTAGGAAACTCACCACTGAAATTAATGGTGGCAACGCACAAAGTAATGTGGATTTCTACATTATTTATGACATCAGCTTATATAGCTGCA
ATATGGTCAATATTGCCCCAAGGGAAGGGGGGATCATTGGGTGCTAAGTGAGGTTGTGATCATAGGGGGATGGCTGTGTTTTTATGTTTGGGGAT
TTTGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E376925] | SGN-U564709 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T189680 [Download][View] | Facility Assigned ID: FA0AAD8AA10FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0011 | Quality Trim Threshold: 14.5 |
Working
