EST details — SGN-E377007

Search information 
Request: 377007Match: SGN-E377007
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175075Clone name: TUS-20-G9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175075 is on microarray TOM1 spot ID 1-1-8.3.13.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23926 [cLED-6-L20] Trace: SGN-T50284 EST: SGN-E233298 Direction: 5' Facility: TIGR
Clone: SGN-C175075 [TUS-20-G9] Trace: SGN-T189763 EST: SGN-E377008 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377007Length: 676 bp (933 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377007 [] (trimmed) CAAGCTTTAAATTAAAAACATTCAGAGTGCCGACATAATTTAAAAGGTTGATATGGCTAATGCCAAAAATCTTATATAGATTATCTGTTTTATAA
CAACTTAAACAAAAGACCAGTTTATGAACATGAAAGCTAGACAGTGATTGGAATCATCGTCGTTGAGAACCTTCCATGCTATGGCTTGCTCATAT
GATATTGGCCTACCCATGCTAGATACACATATTCCTGCTGGCAGATAGGCAAATCCCTGCTGCATTATCTTGGAGAACTCCGATAGGAGAACCTT
ACGACCAGCTTCATCTAAAATCTTATCAAGCATTATATCCTGAAGAGCTAACAAAGTGGTTTCAAGCATGTCAAGACCAGCCTGGTTTGCAAAGG
TAAAAACAGCAGATGCATTCATTTTTACAGAACAACACATTATTGCATCACTATGGTGCCACAGTTGTTTCAGAACAGCATCACCAGCTTGAGAA
TCAACCTGGAACAGGTCTCCTCCTGTATTCACCCTATAGCTCCGGGAAATCCACCTTGCCAAAGTGACAGCTTCAGGTGACACAGGGAAGGATTT
AGGTGTCAACTGAGAACTGAGTCGAGAGGGTGCTATGGCCATTGCAACTCTTTGAACAAAGCCTACTATACTTCGCACATATTGGCGAGCCATTG
AAGCTACTTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377007] SGN-U575608 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189762 [Download][View] Facility Assigned ID: FA0AAD8AD05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0054 Quality Trim Threshold: 12.5