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EST details — SGN-E377011

Search information 
Request: 377011Match: SGN-E377011
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175085Clone name: TUS-20-G19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175085 is on microarray TOM1 spot ID 1-1-6.3.13.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23936 [cLED-6-L8] Trace: SGN-T50098 EST: SGN-E233112 Direction: 5' Facility: TIGR
Clone: SGN-C175085 [TUS-20-G19] Trace: SGN-T189767 EST: SGN-E377012 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377011Length: 555 bp (922 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377011 [] (trimmed) CCCATCTGACAGAACTAGAGACGCAGGTCTCTCAAGTAAGAGTAGAAAACTCCTCTTTATTGAAACGCTTGACTGACATAAGCCAGAAGTACAAT
GAAGCAGCAGTTGACAATAGAGTATTGAAAGCCGATGTTGAGACATTGAGAGCAAAGGTGAAGATGGCTGAAGAAACTGTTAAAAGAGTTACTGG
GTTGAATCCTCTATTCCAAGCTATGTCTGAGATATCGACAGTAATGATGCCATCTTTCACTAGTAGTCCTTTCGACTCATCAGCAGACGCTGCTG
TCCCTGAACATGATGACCTGAACTATCCAGCGCCTGAAAATGGTCATATGCCCAACCATGATTGTAGAATGCAAAACGCGAGAGGCTAGGTTGGA
GCATCTGCAGAAGCGCATCTGCGGAGAAGCAAGTACTTGTGGAAACCAAGGCAAGGGAGAGAAGTAGAATGACTTAATGAGCAGAAGTTACGGCA
AGGAAGATTTCACAGAGATCTGTAAATCTTACATATCAAATTACTTTGAAATAATTAATCTTTTTTTTCTTCATATAGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377011] SGN-U572089 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189766 [Download][View] Facility Assigned ID: FA0AAD8AD10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0025 Quality Trim Threshold: 12.5