EST details — SGN-E377021

Search information 
Request: 377021Match: SGN-E377021
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175135Clone name: TUS-20-I21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175135 is on microarray TOM1 spot ID 1-1-4.1.13.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23992 [cLED-6-O17] Trace: SGN-T49938 EST: SGN-E232952 Direction: 5' Facility: TIGR
Clone: SGN-C175135 [TUS-20-I21] Trace: SGN-T189777 EST: SGN-E377022 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377021Length: 570 bp (901 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377021 [] (trimmed) AAAATAAGATATTTTTCTTTATTGGATGTAATAAAGAAGCGTCATTCCGATGTCAAGCCAGTACATTAACATATTCCATTGCAATTATATTCCAA
AACGCGAGGAAAAAAACTACCATGAAATATCTCTTCCATTTTCTGAGTCCTGGTGTATTTTTCTATGGTAATACAACAGCAATCATACATGTCAA
CCATATTTAACACACAAAAAAAATCAAAACGCTGCCCATCCAGCTGCTGTGGTTTTAGTTTTACTTGATCCAGATCCAGTGGCAGAAGGAAGGCT
TCTCTCAATTTGAGAGAGATTTGAAAGTGGATCAGTGGAATGCCTAGCATTTTCCTTTGACCCCTTGAAATCAATACTGGGAGTAGTAGAAGTCT
TTCGAGACGTAACTGGATCATTTGGAGGGGGTGGAAGAGGAGACCTGATCTTATTACCTCCACTAGGTGGAGGCGCAAGGGCTGGCGTTCTTTTC
ACAAGCTCCTGTTGTTCCAGCCGCCAATCCCACAGCCCGAAGCATGCCCTGTCCCACTAGATGGTTTTGTTTTCACATTTTATTCGGAGTAGGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377021] SGN-U572603 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189776 [Download][View] Facility Assigned ID: FA0AAD8AE11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0064 Quality Trim Threshold: 14.5