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EST details — SGN-E377047

Search information 
Request: 377047Match: SGN-E377047
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175277Clone name: TUS-20-O19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175277 is on microarray TOM1 spot ID 1-1-6.3.13.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24221 [cLED-7-I7] Trace: SGN-T50319 EST: SGN-E231810 Direction: 5' Facility: TIGR
Clone: SGN-C175277 [TUS-20-O19] Trace: SGN-T189803 EST: SGN-E377048 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377047Length: 701 bp (913 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377047 [] (trimmed) AAAATAAGTAAAGAGGGAGAGCTATCTTAGATTTTAACTCAAAACACCAAGTCATCAGGCATTATACAACGCAGAAGTTGGTCCTGCATCTTTGT
TGGCAGCAAACAGGAGCACTAAAGATGAACAAACAGGTAATAAAATCTTAGTGGACAGCATGAATCATCAAATTGAGTACACGGGGTAACTAAAT
GGCAAATAGCAATGTCACTTCATTCCTGCCAATGCTTGATTGTTTGTACCAAAGAAAATGTAGTACAACTAATTGTAGACCATATACTTTGGTGT
TGCACTGAATTTCTGATATCCCTTAATGACCTTGTTAACGGCATCCAGAAAGTCTTTCTCTGTAACAGTTTTCCTCCTTGCTCGAATAGCATACA
TTCCAGCCTCCGTGCACACACTTCTTATATCAGCTCCTGTAGAGTTTGGACAGAGACGTGCCAAAAGTTCAAATCGAATATCGCGCTCACAATTC
ATTGTCCGTGTATGAATCTTAAATATCTGGGTTCTACTCTCTAGATCAGGTAGACCAAACTCAACTTTGCGATCCAAACGTCCAGGACGTAGCAA
TGCTGGATCAAGTGTATCAGGCCTATTGGTGGCCATGAGAACCTTTATATTCCCCCGAGCATCAAATCCATCTAGTTGGTTAACAATTTCAAGCA
TGGTACGCTGAACCTCATTGTCTCCACCTACACCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377047] SGN-U570780 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189802 [Download][View] Facility Assigned ID: FA0AAD8AH10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0042 Quality Trim Threshold: 14.5