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EST details — SGN-E377088

Search information 
Request: 377088Match: SGN-E377088
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175519Clone name: TUS-21-I21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175519 is on microarray TOM1 spot ID 1-1-4.1.13.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15409 [cLED-11-N21] Trace: SGN-T51388 EST: SGN-E235378 Direction: 5' Facility: TIGR
Clone: SGN-C175519 [TUS-21-I21] Trace: SGN-T1373 EST: SGN-E378515 Direction: 5' Facility: Giov. Lab
Clone: SGN-C175519 [TUS-21-I21] Trace: SGN-T190280 EST: SGN-E377089 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377088Length: 657 bp (919 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377088 [] (trimmed) CATGAACTCAACCTGTTCTTGAGCTGAGGTTCTTAGATCATCCTCGAATTGAGGGAATGAATCACAAGTTGAAGTGGCATAGCGGATGGCAGACA
AGAAAACTTCTTTTGTGCCACTTAATTCTGCTTCTTGTATATCCGAAAATATGGGCATGGTATAAGAACTAAGTTTCGAAAATTTCCTATTATCT
TGTACTTGTTATTCTCCAAGGAAAAACCAAACGACTGAGCTACGAAGAATCGAGGACTTTAAACAATATCAAAAGCACATCCAAGAGAGTAGTCC
ACCTGAACCCGAAAAGGGTCAATCTAGACGAATAAAACAAAGATTTGAAAGAAACAAGACTTGTGAGAAGGAGTTGCAATAACGAAAAACAAAAT
GCAGACTGCAAAAAGAGTTCTATAACAAGCTAAAACATAACCAGATTACTAGCTAGAGTGCACTGTTCAAAGTGTAATCCGTAATAAACGGGAGA
AACAAGACCAAATCATCTGCTTAACATAAACGAGACGTAAAAAATTGAATCTTGGGCCTAACTCAATCCCAAAAGCTCGAAGAATGATTGCCGAA
GTCCATATAAGAAGTCCAAACTCACCACATCCCCTGATGTGAGACTTAACACTAGACACTAATAACACAATCCACCTATGCAACTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377088] SGN-U564526 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190279 [Download][View] Facility Assigned ID: FA0AAD9AE11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0021 Quality Trim Threshold: 14.5