EST details — SGN-C37715
| Search information |
| Request: 37715 | Match: SGN-C37715 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C37715 | Clone name: cLEG-42-O19 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177575 is on microarray TOM1: SGN-S1-1-4.3.6.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177575 [TUS-26-O13] | Trace: SGN-T182245 | EST: SGN-E368835 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177575 [TUS-26-O13] | Trace: SGN-T182246 | EST: SGN-E368836 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259640 | Length: 608 bp (947 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259640 [] (trimmed)
GGATCCCCCGTGCTGCAGGGTGCAACCATCACCCCAGATGATGTTCTTGTAAAGGAGTCTAACTTGAAATCCATGGGGAGGATCCCTCATGGGAC
AATCAGAAACATCCTAAATGGAACTGTCTTTATAGAACCAACTATGTGCAAAAATATCCCCACACTTGTCCCAGGTTGGACCAAACCAATTTTCA
TTGGTAGACATGCTTTTGGATATCAATACCGAGCTACTGATACTGTTATTAAAGGAGCTGGAAAACTCAAATTGGTGTTTGTGCCATAAGGATCA
GACGAGAAGACAGAATTTGAAGTTCACAACTTTACTGGTGCTGGTGGAGTAGCTTTATCCATGTACAACACATACGAGTCTGTTCGCGCATTTGC
TGAGGCTTCAATGAACATGGCATTCCAAAAGAAATGGCCGCTCTATCTTAGTACAAAGAATACCATTCTTAAGAAATATGATGGGAGGTTCAAGG
ACATCTTCCAAGAAGTTTATGAAGCAAATTGGAAGTCCAAGTACGAGGAAGCTGGAATCTGGTACGAACACCGTCTTATCTACGATATGGTTGCT
TATGCTTTAAAGAGTGAAAGTGGTTATGTATGGGCCTG
AATCAGAAACATCCTAAATGGAACTGTCTTTATAGAACCAACTATGTGCAAAAATATCCCCACACTTGTCCCAGGTTGGACCAAACCAATTTTCA
TTGGTAGACATGCTTTTGGATATCAATACCGAGCTACTGATACTGTTATTAAAGGAGCTGGAAAACTCAAATTGGTGTTTGTGCCATAAGGATCA
GACGAGAAGACAGAATTTGAAGTTCACAACTTTACTGGTGCTGGTGGAGTAGCTTTATCCATGTACAACACATACGAGTCTGTTCGCGCATTTGC
TGAGGCTTCAATGAACATGGCATTCCAAAAGAAATGGCCGCTCTATCTTAGTACAAAGAATACCATTCTTAAGAAATATGATGGGAGGTTCAAGG
ACATCTTCCAAGAAGTTTATGAAGCAAATTGGAAGTCCAAGTACGAGGAAGCTGGAATCTGGTACGAACACCGTCTTATCTACGATATGGTTGCT
TATGCTTTAAAGAGTGAAAGTGGTTATGTATGGGCCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259640] | SGN-U574588 | Tomato 200607 | Build 2 | 44 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72401 [Download][View] | Facility Assigned ID: TBFGI94TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0173 | Quality Trim Threshold: 14.5 |
Working
