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EST details — SGN-E377159

Search information 
Request: 377159Match: SGN-E377159
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175561Clone name: TUS-21-K15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175561 is on microarray TOM1 spot ID 1-1-2.3.13.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15490 [cLED-13-B16] Trace: SGN-T51747 EST: SGN-E236469 Direction: 5' Facility: TIGR
Clone: SGN-C175561 [TUS-21-K15] Trace: SGN-T190351 EST: SGN-E377160 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377159Length: 693 bp (931 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377159 [] (trimmed) AAAGTAAGACAGTGACAATTATAAGGCTAAAAAACAATACAAAACGGACCAAATTAAATGTCTCACAAATTTAAATAAAAATCTGCATAACTTGA
TTGGTTGTACCAAAAGGGAACAATTTCTTGTAGGCCTCACCCAAAGCCACATTTGTAGTACTATAACCACCATCAATAACTAAATTCAAACCACT
CACATATTTGGAATCATCGCTTGCCAAATACAACACTCCATTTGCTACATTTTGTTCCTCCAATAAAACTCCTTTCAAATTCCCCCCTTCACCAA
ACCATCTTTTTGCCTTTTCTTTTTCGTCTATTCCGAGCGCGTCCAACGCAAGTTTTGTGCTTATATAATGAGGAAAAACGCAATTAACTTTTATT
CCGTATCTTCCTAATTCGACTCCGATGTTTTTACAGAGCCCTAAAACCGCACTTTTTGATGCCGCATAAAAATGTGGGACGATACCATATACTAC
CGTTGCCGCACTTGTCGTGAAAATAATTGAACCTTTTGTATGACTCGAAATCATCACTCTAGCAGCATGTTTCGCGCATAAAAATGCCCCAACGA
CATTTACATCGAACACGTTTTTAATTATATCGGTATCTACGTCTAAAATACTGGAAATCGACTTACCAGCTACACCAGCGTTACTGAACATTATG
TCAAGCTTACCAAATTTGGCAACCGTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377159] SGN-U579700 Tomato 200607 Build 2 54 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190350 [Download][View] Facility Assigned ID: FA0AAD9AF08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.947 Expected Error Rate: 0.0087 Quality Trim Threshold: 14.5