EST details — SGN-E377253

Search information 
Request: 377253Match: SGN-E377253
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174578Clone name: TUS-19-B16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174578 is on microarray TOM1 spot ID 1-1-1.2.15.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23248 [cLED-4-O15] Trace: SGN-T49219 EST: SGN-E231450 Direction: 5' Facility: TIGR
Clone: SGN-C174578 [TUS-19-B16] Trace: SGN-T189606 EST: SGN-E377252 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E377253Length: 569 bp (915 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377253 [] (trimmed) GACTTGAATTTTACTTCAGAAAGCCTCATGCCTGTACACAAAATCAAGGGATACGGCAAACAAAGCAACTGCTAAATGATGTAATCTTGAAATAC
TCCCGAAATGGAATGATTCTGTGGGAATCCCTTCTAGGCTGACTCTCCGAAGTTGCACGTCTCATATTTTGGGCCTTCACCTGAGCGTGTCTAAG
CTTGTTCAGAATCTTATCCATGGATGCTGACCTCCTCTTTTCTAGTTTCATCTCAAGCTTTTGGATTTCTGCTTCTGCTTTGGCCTTCTGCAAGT
TCTCCCAAGCAGCGATCCTGGCTTCCTCTCTTTGCGACTTTGTCATACTCTTTGTTCCATCTACAACATCCCACGTTGAGATAGGCGAACTTATG
TCTGGTAATTGTTTCTTGGGTTTCCTCACCCGGCTTTTCCGAGATAGCCCTAAAATTGGGTCTCCTTTGTCAACCTGCACGTCTCTAATCTCGAC
TTTAGTGGAATGCTGCCTGCTCTGCTCCACTCCAGGAGGGATTGAAGATGACCTTTCCTGGGGAGATGTATGTGTACTGTCATCAGAGCTCATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377253] SGN-U562963 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189607 [Download][View] Facility Assigned ID: FA0AAD7DA08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 0