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EST details — SGN-E377266

Search information 
Request: 377266Match: SGN-E377266
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174662Clone name: TUS-19-F4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174662 is on microarray TOM1 spot ID 1-1-5.2.15.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23378 [cLED-5-D6] Trace: SGN-T49692 EST: SGN-E231076 Direction: 5' Facility: TIGR
Clone: SGN-C174662 [TUS-19-F4] Trace: SGN-T189621 EST: SGN-E377267 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377266Length: 603 bp (913 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377266 [] (trimmed) GAACGTTGAAAAAATTTTACTACTATTATTGTAAGGTCTTCACTACTGATTTTGGCTTACATCAATTTCGAACGACATTCAATTAATTCCACTCA
ACAAAATGACAGAACACAATAACCAAAATATGTCACAGCAAAGATGCCAAATGATACTCCATTACAAGAGGGATCCATTGATAGTACCCAATGCA
AAATCAAAAATTACAGTAAAATTATTCAGCAAACACTCTTTCCTAAAATCCAACTATAACGACTCCATGGCATATATGAACCGTCAAGATAATGA
TGATGCTGATCCTTTTTATGTCATGTCTGAGTTAAAGTTATGCCTTGCTATCAATGCTCATCGGCTCTGGTTCCTTGGGAGCAGAGTTGGCTGAG
TTTGATGAATCCTGCTTATTCAACTTTGCAAACATGTTCCCGTAAAACTTTGCGTCCTTCTTGTTAATTTCCTTGACTTTCTCCTTTAAAGCTTT
GTACTCAAGCTTCACATCCCTGTTGTCAGGATCAATCTCAAGAGCTTTCTTAATGTCAAATTCAGCCAGATCAAGATCAGCCATGTTCATATATG
CTTGAGCTCTGCGGTAAAGAGCTTTGACATTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377266] SGN-U567765 Tomato 200607 Build 2 114 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189620 [Download][View] Facility Assigned ID: FA0AAD7DC02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0067 Quality Trim Threshold: 14.5