EST details — SGN-E377271
| Search information |
| Request: 377271 | Match: SGN-E377271 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C174680 | Clone name: TUS-19-F22 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C174680 is on microarray TOM1 spot ID 1-1-3.2.15.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C23405 [cLED-5-E9] | Trace: SGN-T49570 | EST: SGN-E230954 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C174680 [TUS-19-F22] | Trace: SGN-T189626 | EST: SGN-E377272 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E377271 | Length: 579 bp (907 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E377271 [] (trimmed)
GGGAAGCGGAAATAAAAAATTTGAAAGTCCAAACGAACCAACAAAGGTTTTACCAAGTCCTATTTGCTGCAGGTGGTTTTTTTTTTAATTTAAAA
ACCCCAAATCAAGTTTATTTAAAACCCAAAAACCCTTAAAAAAAAAGGGGCCAACTTTTTTTCAACATGTCAATTTACGGGAAAAAGGGAAAAAC
CTTTGGGGGATAGCCCTTCCCTACCCAACTTGGCAAAATTCATATAAAATGATCCTTTTGGAAAAGGGATGGCCTTTTTTGCTAACTTTTTCCAC
TTAAAGGCATTTTTTTTCATTTTTTTACCCTTTTCTCCAACCATCAACTTTTTCACAAGTTCCTCGACCACTTCCCTTTTCACATTGCTATCAAT
TTCCATCCCGACCCCCCACCGATTACAATTAACCCAACTTTTTGTTTGTTGATCTGCAAAAAAGGGCCACCACAACATTGGCCCCCCATATGATA
TACTTTCGAAGGTCGAATTCCTTCCCCAAGGAGTTAAAAATCCTCCGATTGACGGATGATTTAAAACTTGTTTTTGGGGACACCAACCAACTAAT
AAACCTTTT
ACCCCAAATCAAGTTTATTTAAAACCCAAAAACCCTTAAAAAAAAAGGGGCCAACTTTTTTTCAACATGTCAATTTACGGGAAAAAGGGAAAAAC
CTTTGGGGGATAGCCCTTCCCTACCCAACTTGGCAAAATTCATATAAAATGATCCTTTTGGAAAAGGGATGGCCTTTTTTGCTAACTTTTTCCAC
TTAAAGGCATTTTTTTTCATTTTTTTACCCTTTTCTCCAACCATCAACTTTTTCACAAGTTCCTCGACCACTTCCCTTTTCACATTGCTATCAAT
TTCCATCCCGACCCCCCACCGATTACAATTAACCCAACTTTTTGTTTGTTGATCTGCAAAAAAGGGCCACCACAACATTGGCCCCCCATATGATA
TACTTTCGAAGGTCGAATTCCTTCCCCAAGGAGTTAAAAATCCTCCGATTGACGGATGATTTAAAACTTGTTTTTGGGGACACCAACCAACTAAT
AAACCTTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E377271] | SGN-U587517 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T189625 [Download][View] | Facility Assigned ID: FA0AAD7DC11FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.894 | Expected Error Rate: 0.0281 | Quality Trim Threshold: 14.5 |
Working
