EST details — SGN-E377325

Search information 
Request: 377325Match: SGN-E377325
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175320Clone name: TUS-21-A14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175320 is on microarray TOM1 spot ID 1-1-3.1.13.14 [Order] [Tomato Microarray Database]
See unigene SGN-U578039 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C24282 [cLED-7-L22] Trace: SGN-T50448 EST: SGN-E231939 Direction: 5' Facility: TIGR
Clone: SGN-C175320 [TUS-21-A14] Trace: SGN-T190374 EST: SGN-E377324 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377325Length: 644 bp (933 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377325 [] (trimmed) CAGCTTATGCATACTCATTTTCTTCACTCAATTTTTTAACTCTTTTTTTTTTCTTGGATAATGGCACTGACCCTTCTTCATTCTCCCCTTAATTA
TCACATAAAAATTTTCCAAATTTCAAGATTCAATCAAAAAACCCCATTTCCCACTGCTTAAACAAACCCCACATAGTTTTTTTGTTTTCACAATT
CTTGCACCTTAGAGAACTTAAGGGTTGAAAGTAAAATAAATATGGAAGTTGGAAGGGTTATTAATGAAAAACTTTCTCATTGTCTCTGGATGTCC
AATTCTTCCCCATCTTTTCATGGTTCTGTATCAATGGTTAATTTCGAAGATGTTGGTCGAGGAGAAGTGTCTAAAGAGAGGTCATTTTTCCCAGG
AATTGACAAAGAAGAAACTAGCAATGATGATTATGATAGCTGTTATCATCAGCCAGAGAAGAAGAGAAGACTTTTGCCTAATCAAGTTCAGTTTC
TTGAGAAGAGTTTTGAGGTAGATAACAAGCTTGAACCAGAGAGGAAAGTTCAATTGGCTAATGAACTTGGCTTGCAGCCTAGACAAATTGCTATT
TGGTTTCAAAATAAGCGCGCTCGATACCAAACTAAAGTACTTGAGAAGGATTATGATGCTTTGAAAGCTAGCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377325] SGN-U578039 Tomato 200607 Build 2 54 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190375 [Download][View] Facility Assigned ID: FA0AAD9BA07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.934 Expected Error Rate: 0.0057 Quality Trim Threshold: 14.5