EST details — SGN-E377349

Search information 
Request: 377349Match: SGN-E377349
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175458Clone name: TUS-21-G8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175458 is on microarray TOM1 spot ID 1-1-1.3.13.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15301 [cLED-11-I21] Trace: SGN-T51464 EST: SGN-E235454 Direction: 5' Facility: TIGR
Clone: SGN-C175458 [TUS-21-G8] Trace: SGN-T190400 EST: SGN-E377350 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377349Length: 710 bp (940 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377349 [] (trimmed) AATGGCGAAAAAAATAACTTGGATCTAAATATGTTAATGACACTGTCAATCCACAAAACCATAACACATTACATGAAAACTGCAGATTATTTGCT
CAAGCAACGCATTGTCAGCGTAACAGCTGATAAAAATTACAGCCTAAACTATGTCCCCTTTGCAGCACTTTTTCTTATTCAATGCTATCTCCAGT
CCAGTGCTTCCTTGTGGCTGAGGCAGATACGAGGAGAGTGTTACTTAATCAGTATACATCTAATAGGTGATCCCTCCGCACCAAGCAACCTTAAG
GGAAGACAGTGTACAGTGTACAAGCCAGCTTCTATATCATCCAGCTTCAGCCCTTCTACTAGAATAATCTCCCTGCTTTTCAGGAAAACATGATG
GGCAGGAAGCAAATCATCAAAAGCAGCAACAGATAAGTAATCAATTCCAACAAGTTTGATGTCAGTGTTGTCCACTAGCCACTGAGCTCCATCCT
TCATGAATCCGACATAGCTTGTGTCGAATGCCTTTTTCCACATAAGCCGCCTGTCAGTGTTTAGTGTTCTGAAAAGTACTCGTTTGACTCCCTTG
GGAATATGTAAGGATTGCATAGCATCCGCAGTTAAGTTCTTGTCTCTAGGAACATCAACTAGCAATGCAGGACCATTGAGAACTTCTAGGTCGAG
AGTGTCGACATCAAAGCCAGCATCGAAATAGTGATCGTAAACATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377349] SGN-U581276 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190399 [Download][View] Facility Assigned ID: FA0AAD9BD04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5