EST details — SGN-E377452

Search information 
Request: 377452Match: SGN-E377452
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174955Clone name: TUS-20-B9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174955 is on microarray TOM1 spot ID 1-1-8.2.13.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23790 [cLED-6-F3] Trace: SGN-T50162 EST: SGN-E233176 Direction: 5' Facility: TIGR
Clone: SGN-C174955 [TUS-20-B9] Trace: SGN-T189952 EST: SGN-E377453 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E377452Length: 547 bp (948 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377452 [] (trimmed) AAAACAAAAAAAAAAGGGCTTTCCTTTTTTGGGAAAAAATAACCCCCCCCCTGAGTTTGCCCAAGGGCTTAACTACTTTTTTGTCCGGGGCGGGA
CTGGTGATAGTCCCTTCCAAATCCCCCCCAACAATTGGGGGTTTTAACCTTTACATATAACGATTTGCCCCGATTTATTTTGGCCTTTTTTACTT
GTCAGGGCCCCGGGAGGGCCTAGGATCCCCTACTATAGGGGCCCCTTTTAGGGAAGTCGGCCTACAAAGGAAAATTGCAGGGCCCCCCCGGGCTT
GGAGCTTTACTTGCCCCCCAAACTTGTCACAGGGTTTCGGGGGCCATTTTTTAAAGGGCTAAAAAAAAATCCTTGAAGCGGGCTTTGAGCTTTTT
TTGTTTGCTCCGGAGGGCCTGATATTTGTATGATCTTATTTGTTCCCTCGGGCCTATCCTCAATCAATTTAACATTTGCTCCTGACAACTCACTA
ATTTGAGCAAGCTTATTTTTTGTTTTTGTTATCAGTTGGGGCCCTGCTTGGGGGGGTATGACACCTTCCAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377452] SGN-U594297 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189951 [Download][View] Facility Assigned ID: FA0AAD8CA05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.909 Expected Error Rate: 0.0257 Quality Trim Threshold: 14.5