EST details — SGN-E377577

Search information 
Request: 377577Match: SGN-E377577
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175203Clone name: TUS-20-L17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175203 is on microarray TOM1 spot ID 1-1-8.4.13.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24103 [cLED-7-D21] Trace: SGN-T50564 EST: SGN-E232055 Direction: 5' Facility: TIGR
Clone: SGN-C175203 [TUS-20-L17] Trace: SGN-T190077 EST: SGN-E377578 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377577Length: 517 bp (939 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377577 [] (trimmed) GGCCCGAATTGTTTCGCCCCATAAAGGGTGTACCAATCCTTTGAAAAAATTTCCAATCGGGGGGGGCTGTTTTTCCCTTTCCTCATTTTTTTTAG
GGGGGAACCCAAGTTTTTTTCAAATGACCCCCTTTTTTTTACCCCCTTTTTACCCGTTTTTCCTAAAGCAGTTGGGGGGCCTTGCTTTTTTTTTG
TTTCCTGCCCAACCATAAATTGGGCCACTGTTTTTAATATGTTTTCCCTGTTAATGGGGACTTTGTTTTTTGTTTTTTGAAACCAGGCCTGAACC
CCTAGGGGTCCTCCAATTTTTAATTTTTTTACGAGTAGTTTTTTTTTAAAAAATTGTTCAGTTGATAGGGGCCTTGGGACCTTTGGCCCTCCACC
CTTTACTTTTTTGAGCAATGGGTTCCTTCCCCAAGGGGTCACAAACCCTCCAGTTTTTTTATGATCAGGGATAACCCCCTGGGGGGCCCTTCTTT
TTATTTTAAAACCTGGCCCGTTCACTTTTTCCTAAAATCTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377577] SGN-U597697 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190076 [Download][View] Facility Assigned ID: FA0AAD8CF09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.874 Expected Error Rate: 0.0316 Quality Trim Threshold: 14.5