EST details — SGN-E377632

Search information 
Request: 377632Match: SGN-E377632
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175118Clone name: TUS-20-I4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175118 is on microarray TOM1 spot ID 1-1-5.1.14.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23971 [cLED-6-N18] Trace: SGN-T50198 EST: SGN-E233212 Direction: 5' Facility: TIGR
Clone: SGN-C175118 [TUS-20-I4] Trace: SGN-T189844 EST: SGN-E377633 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377632Length: 717 bp (915 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377632 [] (trimmed) AGCAAATTGAAGTTTGATATTCCACTCTCTTTATATACATACAATTTGTGCAGTTCAACTAAAGAAAGTATATACAGAATTTATAATAATGAGCA
GCAAGAGTTAATAGATTGATAATAAGATGGTCCTTCAGTCAGACTACTCTTCTCGTACTCTTCAAACATGTCTTGACTCACCACGATTGTTTATC
AAAGAATGACTCTGGGGAGCAAACTTGTCTGTACTCTTCAAACATGTGTGACTCACTGTGAACATTTATCGAAGAATAACTCTGATTATCAAATG
ATTATGCACAACCAGGAGCAATTCACACGTGTCGTATCTTTCAAAAGTAGTAGTGTATTTTCGAAGAATCTTAAAATCCCCTTACTGAACTCTGC
CAAACTTCAACAAATTGTTGATCTTTCCTTGTAACAAACATCTTGTTACCTCCAAAGCTGAAATGTGTTATCTTATTTCCACAACTATCTTTTGC
TCTCCCCATTGAGTTCTTCCTAAAGACTCGATCTTTAATCGAAGAACCAATCAAAACCTCAGACCATAATTCGAGATTTCCACCTTTACTACAAA
AAACTTGATTCCCATGACTCTCAATTTTACTCCCAAACCCTTCTTTCTTACCATTTGTTGCTTTTCTTGAATCACCAAGACAAGTCCAAGTATTT
TCCTTACCAATGTTTCTCAAATCCGATATGAAAACTTCGCCTGAATGAACGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377632] SGN-U567213 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189843 [Download][View] Facility Assigned ID: FA0AAD8BE02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.940 Expected Error Rate: 0.0079 Quality Trim Threshold: 14.5