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EST details — SGN-E377649

Search information 
Request: 377649Match: SGN-E377649
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175186Clone name: TUS-20-K24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175186 is on microarray TOM1 spot ID 1-1-1.3.13.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E377649Length: 623 bp (880 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E377649 [] (trimmed) AAATAATAATCATCGATCTGCAGTATATGGCGAGCAATAGTTGCAACAAATCTTTCTGTAGCAACTATATGTTGCTAAAGCCAGAAGAATGTAGC
GTATTAGATTTGGCAAAACTTTTACTTTCCGGTAAAAAATTGGGACAAAAAGACTTCATCGACTGCCCTAATGAAGAAATGACTAAGGAGCCTTT
GTCACGTAGATGGGTTATATTTTTATCTATACTAGTCCAGAAGATTTTACTCGCAACTGCTAAGCCTTTAGCTGGATTGGGCAATGCTATTGAGT
ACTGGCTTAACCTTCAAAACGTCAATGGCGGATTCTTCCGTCTTCTTTTCAAATCCTTAATATGTAAAGCTGTATCACCGGATAAGGAATCAGCT
GCGTACTTGTCATTTATTGGAAATTTGGATAAAAGAGTTGATCTGGATTTTAGTAAGAATGTTGGAGGACGTAGAAGATATGATGAAGGAATCAG
CATGATGGCTGCAAAAGCAGCTTATGAGAACAAAGCATATGTTGAAAACTACTGTCAACCATCATTGGAAGATGGATCTGGTGGGATCATTTGAC
TTCTGGAATGGGTGGGCCGGAAAATAAAAGGTCGTGAGACAAATTACCCGGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377649] SGN-U575840 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189860 [Download][View] Facility Assigned ID: FA0AAD8BF12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0058 Quality Trim Threshold: 14.5