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EST details — SGN-E377755

Search information 
Request: 377755Match: SGN-E377755
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175401Clone name: TUS-21-D23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175401 is on microarray TOM1 spot ID 1-1-2.4.13.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15188 [cLED-11-D14] Trace: SGN-T51404 EST: SGN-E235394 Direction: 5' Facility: TIGR
Clone: SGN-C175401 [TUS-21-D23] Trace: SGN-T190518 EST: SGN-E377756 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377755Length: 562 bp (877 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377755 [] (trimmed) CCTGGGGCAATACTTTCATTATCTAACTAAATTTCATGAGCAACTAACTAAAACTAAAACTAACATGTTACTCCAATATATAATACAATAACAAT
TTAATCCTTTCAACAAACAGTAATTTTGTGTCATTTGAAAGGTAATTAAATCATCATATAATTCAAAAAAGTAATCCTGAAATGGCTGTAGCAAC
TGTAGCTGCAAAACTAGGATTCTTCGACAACGAAAACCCCATTTGTTCGACTAAATATTGTTGTTGCACTGAATTTGGGTTGATGTCTTTCATGA
ATTTGTTCAAAAATGTTGGATCTGTTGTATTCACTAATGGCACTGTTATTTCAGCTTGAGGGGGTTGGGGATGATTGGGTTCCCCTTCATATGTA
GCTACTAAAATTGATGCATTTTTAACACTTCTTTGTACCTTTTTCTTGACTGGACATGATGGTGCAAATGAACACTTAAAATAGGCTTTTGGAGA
AGGATTATTTCTTGTCACTTTTTGACCATATTTTCTCCAATTATATCCATCTTTCACCATTGAAGTTTGATCGGAGGGATTATTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377755] SGN-U583016 Tomato 200607 Build 2 32 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190517 [Download][View] Facility Assigned ID: FA0AAD9CB12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.930 Expected Error Rate: 0.0122 Quality Trim Threshold: 14.5