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EST details — SGN-E377787

Search information 
Request: 377787Match: SGN-E377787
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175587Clone name: TUS-21-L17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175587 is on microarray TOM1 spot ID 1-1-8.4.13.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15541 [cLED-13-D4] Trace: SGN-T51901 EST: SGN-E236623 Direction: 5' Facility: TIGR
Clone: SGN-C175587 [TUS-21-L17] Trace: SGN-T190548 EST: SGN-E377786 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377787Length: 580 bp (946 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377787 [] (trimmed) ATTATTGGAGTTGAGCCATATGGTGCAGCTTCAATGACATTGTCATTGCATGAAGGACATAGAGTGAAATTATCAAATGTTGATACTTTTGCTGA
CGGTGTAGCTGTTGCACTAGTTGGTGAATACACTTTTGCAAAATGCCAAGAGTTAATTGATGGAATGGTACTTGTTGCAAATGATGGTATTAGTG
CTGCAATAAAGGATGTGTATGATGAAGGAAGGAACATATTAGAGACATCAGGTGCAGTGGCCATAGCTGGAGCTGCAGCCTATTGTGAATTTTAT
AAAATAAAAAATGAAAATATTGTAGCAATTGCAAGTGGAGCTAATATGGATTTCAGCAAACTACACAAAGTTACAGAGTTAGCAGGGTTAGGTTC
AGGCAAAGAGGCTTTATTGGCTACTTTTATGGTAGAACAACAAGGAAGCTTCAAGACATTTGTTGGACTTGTGGGCTCTTTGAATTTTACTGAAT
TGACATACAGATTCACTTCTGAAAGGAAAAATGCTCTAATTTTGTACAGGGTTAATGTTGATAAAGAATCAGATCTTGAAAAAATGATTGAGGAT
ATGAAATCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377787] SGN-U570558 Tomato 200607 Build 2 227 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190549 [Download][View] Facility Assigned ID: FA0AAD9CF09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.938 Expected Error Rate: 0.0059 Quality Trim Threshold: 14.5